RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 DPPA5A6NC42 116 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 GAGE10A6NGK3 116 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 SLC15A5A6NIM6 579 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 ENO4A6NNW6 628 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 ERI2A8K979 691 aaKnown RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 FOXO6A8MYZ6 492 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 SLCO1B7G3V0H7 640 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 TBX10O75333 385 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 GUCY1B2O75343 617 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 PAPSS2O95340 614 aaPredicted RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 ACADMP11310 421 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 AKR1A1P14550 325 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 CYP2F1P24903 491 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 DNAJB1P25685 340 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 TYK2P29597 1187 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 SERPINB6P35237 376 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 SERPINB5P36952 375 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 RGS2P41220 211 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 GPD2P43304 727 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 CSE1LP55060 971 aaKnown RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 DSCR9P59020 149 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 MRPS5P82675 430 aaKnown RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 RBP5P82980 135 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 MBTD1Q05BQ5 628 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 KDSRQ06136 332 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 NIPAL4Q0D2K0 466 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 BST2Q10589 180 aaKnown RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 MED21Q13503 144 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 CAMK1Q14012 370 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 PDK1Q15118 436 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 MAPRE2Q15555 327 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 TBCEQ15813 527 aaPredicted RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 CDO1Q16878 200 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 GOLGA7BQ2TAP0 167 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 PDPK2PQ6A1A2 396 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 TXNRD3NBQ6F5E7 133 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 CASC4Q6P4E1 433 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 RFWD3Q6PCD5 774 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 INO80CQ6PI98 192 aaPredicted RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 DHRS13Q6UX07 377 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 SH2D5Q6ZV89 423 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 SLC26A9Q7LBE3 791 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 STRADAQ7RTN6 431 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 RNF144BQ7Z419 303 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 ZNF329Q86UD4 541 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 UNC93AQ86WB7 457 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 EMC1Q8N766 993 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 LRRC52Q8N7C0 313 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 PLD5Q8N7P1 536 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 RBM15BQ8NDT2 890 aaKnown RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 ZCCHC10Q8TBK6 192 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 FAM172AQ8WUF8 416 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 TFB1MQ8WVM0 346 aaKnown RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 PRPF31Q8WWY3 499 aaKnown RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 RXFP2Q8WXD0 754 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 NCSTNQ92542 709 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 SPATA13Q96N96 652 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 TSPAN18Q96SJ8 248 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 KLF6Q99612 283 aaPredicted RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 SNRNP25Q9BV90 132 aaKnown RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 CCDC106Q9BWC9 280 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 FZD8Q9H461 694 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 SMYD3Q9H7B4 428 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 KCNK13Q9HB14 408 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 BEX4Q9NWD9 120 aaPredicted RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 ERAP1Q9NZ08 941 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 EPS15L1Q9UBC2 864 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 PCSK1NQ9UHG2 260 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 TSPAN16Q9UKR8 245 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 STAP1Q9ULZ2 295 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 PLA2G4CQ9UP65 541 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 MAGED1Q9Y5V3 778 aaPredicted RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 GREB1Q4ZG55 1949 aa4.89□□□□□ -1.63
LINC00458-202ENST00000427299 COL4A4P53420 1690 aaPredicted RBP4.89□□□□□ -1.63
LINC00458-202ENST00000427299 PLXNA3P51805 1871 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 SCN8AQ9UQD0 1980 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 FAM237BA0A1B0GVD1 139 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 TCRBV7S3A2A0A539 114 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 CLEC18AA5D8T8 446 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ARHGAP42A6NI28 874 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 SDR42E2A6NKP2 422 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 CASQ2O14958 399 aaPredicted RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 DAB1O75553 588 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 TNFAIP8O95379 198 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 STAMBPO95630 424 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 EDN1P05305 212 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 CLEC3BP05452 202 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 LYNP07948 512 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 CD48P09326 243 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 CSH1P0DML2 217 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 CSH2P0DML3 217 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 PORP16435 677 aaPredicted RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 SPRP35270 261 aaPredicted RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 GGT5P36269 586 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 PSMC4P43686 418 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 SLC1A6P48664 564 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 GLUD2P49448 558 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 LIMK2P53671 638 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 RPP30P78346 268 aaKnown RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 PDE1BQ01064 536 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms