RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 SLC52A3Q9NQ40 469 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 TUBA8Q9NY65 449 aaPredicted RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 VPS29Q9UBQ0 182 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 ZNF510Q9Y2H8 683 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 CSF2P04141 144 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 CLK3P49761 638 aaKnown RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 RAB25P57735 213 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 SNRPD1P62314 119 aaKnown RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 ALDH6A1Q02252 535 aaKnown RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 RPS26P11Q5JNZ5 115 aaPredicted RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 COX20Q5RI15 118 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 TYW3Q6IPR3 259 aaKnown RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 TMEM220Q6QAJ8 160 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 PTRH1Q86Y79 214 aaKnown RBP12.9□□□□□ -0.34
USP42-203ENST00000426246 RIMKLAQ8IXN7 391 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 UBASH3BQ8TF42 649 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 KAT2AQ92830 837 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 SUV39H2Q9H5I1 410 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 IL20RAQ9UHF4 553 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 ERGIC3Q9Y282 383 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 BOLA1Q9Y3E2 137 aa12.9□□□□□ -0.34
USP42-203ENST00000426246 TRBV23OR9-2A0A075B6M9 112 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 OR10H3O60404 316 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 LHCGRP22888 699 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 ATP6V1E1P36543 226 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 NTHL1P78549 312 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 VMACQ2NL98 169 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 CPZQ66K79 652 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 LAIR1Q6GTX8 287 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 OR2AP1Q8NGE2 309 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 ZNF420Q8TAQ5 688 aaPredicted RBP12.89□□□□□ -0.35
USP42-203ENST00000426246 DNASE1L2Q92874 299 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 ITFG2Q969R8 447 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 EXOSC8Q96B26 276 aaKnown RBP12.89□□□□□ -0.35
USP42-203ENST00000426246 RAD9AQ99638 391 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 EQTNQ9NQ60 294 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 HEBP1Q9NRV9 189 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 SNTG1Q9NSN8 517 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 WNT6Q9Y6F9 365 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 SCN2AQ99250 2005 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 WASHC1A8K0Z3 465 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 H0YAE9 185 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 WWP2O00308 870 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 PCDHGA12O60330 932 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 ERAL1O75616 437 aaKnown RBP12.89□□□□□ -0.35
USP42-203ENST00000426246 CR2P20023 1033 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 GSTM2P28161 218 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 SUOXP51687 545 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 CTSCP53634 463 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 TMBIM6P55061 237 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 ACVR1Q04771 509 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 PLEKHG6Q3KR16 790 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 INO80DQ53TQ3 878 aaPredicted RBP12.89□□□□□ -0.35
USP42-203ENST00000426246 PRSS36Q5K4E3 855 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 RBM48Q5RL73 367 aaKnown RBP12.89□□□□□ -0.35
USP42-203ENST00000426246 WASH2PQ6VEQ5 465 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 RNF130Q86XS8 419 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 LGI4Q8N135 537 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 LEMD2Q8NC56 503 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 CEP44Q9C0F1 390 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 FAM83DQ9H4H8 585 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 POPDC3Q9HBV1 291 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 OARD1Q9Y530 152 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 TLL1O43897 1013 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 LZTS3O60299 673 aaPredicted RBP12.89□□□□□ -0.35
USP42-203ENST00000426246 SNX4O95219 450 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 GPC1P35052 558 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 ZNF284Q2VY69 593 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 PTCHD4Q6ZW05 846 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 ZNF551Q7Z340 670 aaPredicted RBP12.89□□□□□ -0.35
USP42-203ENST00000426246 ZFP41Q8N8Y5 198 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 OR8J3Q8NGG0 315 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 GANCQ8TET4 914 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 XAGE5Q8WWM1 108 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 MCOLN1Q9GZU1 580 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 OR2AG1Q9H205 316 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 ANKRD36A6QL64 1941 aa12.89□□□□□ -0.35
USP42-203ENST00000426246 ETHE1O95571 254 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 EBLN1P0CF75 366 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 SDHBP21912 280 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 LIPAP38571 399 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 NNMTP40261 264 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 PPP2R2BQ00005 443 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 ST3GAL4Q11206 333 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 NPRL3Q12980 569 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 DEPDC1Q5TB30 811 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 THOC6Q86W42 341 aaKnown RBP12.88□□□□□ -0.35
USP42-203ENST00000426246 CADM3Q8N126 398 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 OR10G2Q8NGC3 310 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 FOPNLQ96NB1 174 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 SIAEQ9HAT2 523 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 TIGARQ9NQ88 270 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 PCDHGA10Q9Y5H3 936 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 CNOT3O75175 753 aaKnown RBP12.88□□□□□ -0.35
USP42-203ENST00000426246 ERN1O75460 977 aaKnown RBP12.88□□□□□ -0.35
USP42-203ENST00000426246 CXCL14O95715 111 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 FHP07954 510 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 ZNF12P17014 697 aa12.88□□□□□ -0.35
USP42-203ENST00000426246 SSTR4P31391 388 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms