RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 CCDC30Q5VVM6 783 aa3.17□□□□□ -1.9
LINC01040-201ENST00000425048 PRSS55Q6UWB4 352 aaPredicted RBP3.17□□□□□ -1.9
LINC01040-201ENST00000425048 IQCHQ86VS3 1027 aa3.17□□□□□ -1.9
LINC01040-201ENST00000425048 MINDY1Q8N5J2 469 aa3.17□□□□□ -1.9
LINC01040-201ENST00000425048 CFAP61Q8NHU2 1237 aa3.17□□□□□ -1.9
LINC01040-201ENST00000425048 ROBO4Q8WZ75 1007 aa3.17□□□□□ -1.9
LINC01040-201ENST00000425048 CASP10Q92851 521 aa3.17□□□□□ -1.9
LINC01040-201ENST00000425048 TEX12Q9BXU0 123 aa3.17□□□□□ -1.9
LINC01040-201ENST00000425048 CRNNQ9UBG3 495 aaPredicted RBP3.17□□□□□ -1.9
LINC01040-201ENST00000425048 DDX25Q9UHL0 483 aaKnown RBP3.17□□□□□ -1.9
LINC01040-201ENST00000425048 SLC24A2Q9UI40 661 aa3.17□□□□□ -1.9
LINC01040-201ENST00000425048 SMG6Q86US8 1419 aaKnown RBP3.17□□□□□ -1.9
LINC01040-201ENST00000425048 RTCAO00442 366 aaKnown RBP3.16□□□□□ -1.9
LINC01040-201ENST00000425048 DYNC1I1O14576 645 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 INPP4BO15327 924 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 GIFP27352 417 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 SLC1A4P43007 532 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 TNNT2P45379 298 aaPredicted RBP3.16□□□□□ -1.9
LINC01040-201ENST00000425048 ASCL1P50553 236 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 CYLC2Q14093 348 aaPredicted RBP3.16□□□□□ -1.9
LINC01040-201ENST00000425048 NONOQ15233 471 aaKnown RBP eCLIP3.16□□□□□ -1.9
LINC01040-201ENST00000425048 FAAH2Q6GMR7 532 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 C17orf53Q8N3J3 647 aaPredicted RBP3.16□□□□□ -1.9
LINC01040-201ENST00000425048 TSPAN14Q8NG11 270 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 OR4C15Q8NGM1 316 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 OR5M9Q8NGP3 310 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 NABP1Q96AH0 204 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 PTERQ96BW5 349 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 FAM120BQ96EK7 910 aaKnown RBP3.16□□□□□ -1.9
LINC01040-201ENST00000425048 IL12RB2Q99665 862 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 GOLPH3LQ9H4A5 285 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 TXNDC16Q9P2K2 825 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 Q9UF83 564 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 FBXL4Q9UKA2 621 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 AKNAQ7Z591 1439 aa3.16□□□□□ -1.9
LINC01040-201ENST00000425048 EIF4G1Q04637 1599 aaKnown RBP3.16□□□□□ -1.9
LINC01040-201ENST00000425048 TRAV24A0A0B4J272 114 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 WI2-2373I1.2A0A1W2PRP0 233 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 MAGEB2O15479 319 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 EPCAMP16422 314 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 CLDN15P56746 228 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 APPL2Q8NEU8 664 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 FLVCR1-AS1Q8TAF5 88 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 PROX1Q92786 737 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 TRIM44Q96DX7 344 aaPredicted RBP3.15□□□□□ -1.91
LINC01040-201ENST00000425048 NEDD4LQ96PU5 975 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 ACTL8Q9H568 366 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 RAVER2Q9HCJ3 691 aaKnown RBP3.15□□□□□ -1.91
LINC01040-201ENST00000425048 MYOZ2Q9NPC6 264 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 CGNQ9P2M7 1197 aaKnown RBP3.15□□□□□ -1.91
LINC01040-201ENST00000425048 PILRBQ9UKJ0 227 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 RB1CC1Q8TDY2 1594 aa3.15□□□□□ -1.91
LINC01040-201ENST00000425048 ABCC9O60706 1549 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 AGAP14A8MT82 685 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 ATP6AP2O75787 350 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 SEMA4FO95754 770 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 CSN3P07498 182 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 PTMSP20962 102 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 SFTPDP35247 375 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 MC1RQ01726 317 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 ITPK1Q13572 414 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 BAATQ14032 418 aaPredicted RBP3.14□□□□□ -1.91
LINC01040-201ENST00000425048 WSCD1Q658N2 575 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 CPEB2Q7Z5Q1 589 aaKnown RBP3.14□□□□□ -1.91
LINC01040-201ENST00000425048 NXPE2Q96DL1 559 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 FEVQ99581 238 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 MRPL1Q9BYD6 325 aaKnown RBP3.14□□□□□ -1.91
LINC01040-201ENST00000425048 GIMAP4Q9NUV9 329 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 POLLQ9UGP5 575 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 ABCA5Q8WWZ7 1642 aa3.14□□□□□ -1.91
LINC01040-201ENST00000425048 TNIKQ9UKE5 1360 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 UQCRHLA0A096LP55 91 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 PTGESO14684 152 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 SRPX2O60687 465 aaPredicted RBP3.13□□□□□ -1.91
LINC01040-201ENST00000425048 KBTBD11O94819 623 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 PROS1P07225 676 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 UQCRHP07919 91 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 UCNP55089 124 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 NAP1L1P55209 391 aaKnown RBP3.13□□□□□ -1.91
LINC01040-201ENST00000425048 POLR2LP62875 67 aaKnown RBP3.13□□□□□ -1.91
LINC01040-201ENST00000425048 UBXN2AP68543 259 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 NAAAQ02083 359 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 CREB5Q02930 508 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 LTB4RQ15722 352 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 NTRK2Q16620 822 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 ZNF530Q6P9A1 599 aaPredicted RBP3.13□□□□□ -1.91
LINC01040-201ENST00000425048 CCDC60Q8IWA6 550 aaPredicted RBP3.13□□□□□ -1.91
LINC01040-201ENST00000425048 PAPOLGQ9BWT3 736 aaKnown RBP3.13□□□□□ -1.91
LINC01040-201ENST00000425048 WDR41Q9HAD4 459 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 ISY1Q9ULR0 285 aaKnown RBP3.13□□□□□ -1.91
LINC01040-201ENST00000425048 MRPL11Q9Y3B7 192 aaKnown RBP3.13□□□□□ -1.91
LINC01040-201ENST00000425048 NCOA2Q15596 1464 aa3.13□□□□□ -1.91
LINC01040-201ENST00000425048 CTTNBP2Q8WZ74 1663 aa3.12□□□□□ -1.91
LINC01040-201ENST00000425048 NLRP1Q9C000 1473 aa3.12□□□□□ -1.91
LINC01040-201ENST00000425048 IGKV6-21A0A0C4DH24 114 aa3.12□□□□□ -1.91
LINC01040-201ENST00000425048 A8MVM7 634 aa3.12□□□□□ -1.91
LINC01040-201ENST00000425048 TRIM77I1YAP6 450 aa3.12□□□□□ -1.91
LINC01040-201ENST00000425048 EPB41L2O43491 1005 aaKnown RBP3.12□□□□□ -1.91
LINC01040-201ENST00000425048 CD1DP15813 335 aa3.12□□□□□ -1.91
LINC01040-201ENST00000425048 CD22P20273 847 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms