RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 IRF3Q14653 427 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 ARMCX4Q5H9R4 360 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 ATAD3CQ5T2N8 411 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 ZNF648Q5T619 568 aaPredicted RBP13.83□□□□□ -0.2
MSH5-206ENST00000423982 NEK10Q6ZWH5 1172 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 GAREM2Q75VX8 874 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 TSEN54Q7Z6J9 526 aaKnown RBP13.83□□□□□ -0.2
MSH5-206ENST00000423982 DNAJC22Q8N4W6 341 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 TCEAL4Q96EI5 215 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 HRASLS5Q96KN8 279 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 OR5M11Q96RB7 305 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 ADGRE3Q9BY15 652 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 DDX28Q9NUL7 540 aaKnown RBP13.83□□□□□ -0.2
MSH5-206ENST00000423982 FCF1Q9Y324 198 aaKnown RBP13.83□□□□□ -0.2
MSH5-206ENST00000423982 RWDD3Q9Y3V2 267 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.83□□□□□ -0.2
MSH5-206ENST00000423982 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.83□□□□□ -0.2
MSH5-206ENST00000423982 HOXC11O43248 304 aaPredicted RBP13.83□□□□□ -0.2
MSH5-206ENST00000423982 ACSL4O60488 711 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 STK16O75716 305 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 CLDN9O95484 217 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 RPLP0P05388 317 aaKnown RBP13.83□□□□□ -0.2
MSH5-206ENST00000423982 RHOCP08134 193 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 POU2F1P14859 743 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 ACPPP15309 386 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 CCR2P41597 374 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 RNF219Q5W0B1 726 aaPredicted RBP13.83□□□□□ -0.2
MSH5-206ENST00000423982 LRRC66Q68CR7 880 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 TMC5Q6UXY8 1006 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 OR6F1Q8NGZ6 308 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 LILRB4Q8NHJ6 448 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 NTMT1Q9BV86 223 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 TM6SF2Q9BZW4 377 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 NUAK2Q9H093 628 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 TRPS1Q9UHF7 1281 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 BTBD3Q9Y2F9 522 aa13.83□□□□□ -0.2
MSH5-206ENST00000423982 CARNS1A5YM72 827 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 K7ERQ8 282 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 PRAMEF4O60810 478 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 KLKB1P03952 638 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 CKMP06732 381 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ABCB1P08183 1280 aaPredicted RBP13.82□□□□□ -0.2
MSH5-206ENST00000423982 CXCR2P25025 360 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 OR1E2P47887 323 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 RGS4P49798 205 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ERVK-21P61565 698 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ELP6Q0PNE2 266 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ZMAT1Q5H9K5 638 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 AGAP6Q5VW22 663 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 PRAMEF9Q5VWM5 478 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 NRARPQ7Z6K4 114 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 UTP15Q8TED0 518 aaKnown RBP13.82□□□□□ -0.2
MSH5-206ENST00000423982 ING5Q8WYH8 240 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 C7orf34Q96L11 122 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 AGAP4Q96P64 663 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 CDK5RAP1Q96SZ6 601 aaKnown RBP13.82□□□□□ -0.2
MSH5-206ENST00000423982 NXF2Q9GZY0 626 aaKnown RBP13.82□□□□□ -0.2
MSH5-206ENST00000423982 PLSCR3Q9NRY6 295 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 TMA7Q9Y2S6 64 aaKnown RBP13.82□□□□□ -0.2
MSH5-206ENST00000423982 BRWD1Q9NSI6 2320 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 C5orf67F2Z3F1 127 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 H7C0S8 307 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 C9P02748 559 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 KRT8P05787 483 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 CDK1P06493 297 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ZDHHC11BP0C7U3 371 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 KIR3DL1P43629 444 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 TGM4P49221 684 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ITGA1P56199 1179 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 OR2B6P58173 313 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ST3GAL4Q11206 333 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 TBCEQ15813 527 aaPredicted RBP13.82□□□□□ -0.2
MSH5-206ENST00000423982 CBLL1Q75N03 491 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 SERPINA11Q86U17 422 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 CACTIN-AS1Q8N1I8 211 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ZBTB2Q8N680 514 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 SLC5A8Q8N695 610 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 TBC1D20Q96BZ9 403 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 NIPSNAP1Q9BPW8 284 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ELOVL6Q9H5J4 265 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ADPRHL2Q9NX46 363 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 ASIC5Q9NY37 505 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 TBC1D14Q9P2M4 693 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 MBD1Q9UIS9 605 aaPredicted RBP13.82□□□□□ -0.2
MSH5-206ENST00000423982 DNMT3LQ9UJW3 386 aa13.82□□□□□ -0.2
MSH5-206ENST00000423982 CLCA1A8K7I4 914 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 PDZK1P1A8MUH7 402 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 H3BQ06 376 aaPredicted RBP13.81□□□□□ -0.2
MSH5-206ENST00000423982 ZW10O43264 779 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 KIAA0513O60268 411 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 KRT6AP02538 564 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 KRT6BP04259 564 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 ZNF7P17097 686 aaPredicted RBP13.81□□□□□ -0.2
MSH5-206ENST00000423982 AZGP1P25311 298 aaKnown RBP13.81□□□□□ -0.2
MSH5-206ENST00000423982 KRT6CP48668 564 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 RGS6P49758 472 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 WNT3P56703 355 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 ZNF45Q02386 682 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 PRKCDQ05655 676 aa13.81□□□□□ -0.2
MSH5-206ENST00000423982 MADCAM1Q13477 382 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms