RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 MARC1Q5VT66 337 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 PDE12Q6L8Q7 609 aaKnown RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 HSDL2Q6YN16 418 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 C16orf62Q7Z3J2 963 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 SLC5A8Q8N695 610 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 RTL3Q8N8U3 475 aaKnown RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 C19orf18Q8NEA5 215 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 ATP6V1C2Q8NEY4 427 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 UTP15Q8TED0 518 aaKnown RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 EEF1AKMT1Q8WVE0 214 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 KLHL6Q8WZ60 621 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 LINGO1Q96FE5 620 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 GFM1Q96RP9 751 aaKnown RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 PIGUQ9H490 435 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 SP110Q9HB58 689 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 LRTM1Q9HBL6 345 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 ERAP1Q9NZ08 941 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 ZMYM5Q9UJ78 669 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 VPS9D1Q9Y2B5 631 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 LSM2Q9Y333 95 aaKnown RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 PCDH17O14917 1159 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 PPM1BO75688 479 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 RECQL4O94761 1208 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 IGLV3-25P01717 112 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 EIF4EBP2Q13542 120 aaPredicted RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 COL28A1Q2UY09 1125 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 C18orf21Q32NC0 220 aaPredicted RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 TRIQKQ629K1 86 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 TMEM81Q6P7N7 255 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 RNF165Q6ZSG1 346 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 TRIM46Q7Z4K8 759 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 MILR1Q7Z6M3 343 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 SLC44A2Q8IWA5 706 aaPredicted RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 SLC37A3Q8NCC5 494 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 ZNF431Q8TF32 576 aaPredicted RBP7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 EXOC2Q96KP1 924 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 SAMD11Q96NU1 681 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 RTP3Q9BQQ7 232 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 ARHGAP39Q9C0H5 1083 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 IPPKQ9H8X2 491 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 CRTAC1Q9NQ79 661 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 NDUFB11Q9NX14 153 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 ATP6V1HQ9UI12 483 aa7.74□□□□□ -1.17
HMGXB4-202ENST00000418170 LYRM1O43325 122 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PLOD3O60568 738 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ATG13O75143 517 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 CDRT1O95170 752 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 B3GALT4O96024 378 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SLC2A2P11168 524 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PIPP12273 146 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 BCKDHAP12694 445 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 WEE1P30291 646 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 HOXA11P31270 313 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 LILRA4P59901 499 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 MXD1Q05195 221 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PPIGQ13427 754 aaKnown RBP eCLIP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 FLYWCH1Q4VC44 716 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 KLHL12Q53G59 568 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 METTL2BQ6P1Q9 378 aaKnown RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SLC27A1Q6PCB7 646 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 CPA6Q8N4T0 437 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SIDT2Q8NBJ9 832 aaKnown RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 FATE1Q969F0 183 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 CDKN2AIPNLQ96HQ2 116 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 FCRL2Q96LA5 508 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 KLHL5Q96PQ7 755 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 HTATIP2Q9BUP3 242 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PDGFCQ9NRA1 345 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 FARSBQ9NSD9 589 aaKnown RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 RIMKLBQ9ULI2 386 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SSR3Q9UNL2 185 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ING4Q9UNL4 249 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PCDHGB7Q9Y5F8 929 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PCP4L1A6NKN8 68 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 HHLA1C9JL84 531 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 NDUFS3O75489 264 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 COL6A1P12109 1028 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ANXA8P13928 327 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 CLDN8P56748 225 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 KCNJ10P78508 379 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 UBE3AQ05086 875 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 HNRNPA0Q13151 305 aaKnown RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PTPRNQ16849 979 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ZNF628Q5EBL2 1059 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PTOV1Q86YD1 416 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 TIGD4Q8IY51 512 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 C1orf52Q8N6N3 182 aaKnown RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ZBTB44Q8NCP5 570 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 OR10G2Q8NGC3 310 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 OR8K5Q8NH50 307 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ARRDC2Q8TBH0 407 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 TPD52L3Q96J77 140 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SORCS2Q96PQ0 1159 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 GOLGA2P5Q9HBQ8 144 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 RLIMQ9NVW2 624 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 MGAT4AQ9UM21 535 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SCML1Q9UN30 329 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SLC6A14Q9UN76 642 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PADI2Q9Y2J8 665 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms