RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 RNF111Q6ZNA4 994 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 SLC24A5Q71RS6 500 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 MTMR14Q8NCE2 650 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 OLIG1Q8TAK6 271 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 CRELD1Q96HD1 420 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 SLC35G5Q96KT7 338 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 GAL3ST4Q96RP7 486 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 AIG1Q9NVV5 245 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 RDH8Q9NYR8 311 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 TCRBV5S1A1TA0A578 114 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 TRBC2A0A5B9 178 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 GRM6O15303 877 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 PCCBP05166 539 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 YES1P07947 543 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 DNASE1L1P49184 302 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 CBFBQ13951 182 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 CAMK1Q14012 370 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 SPCS2Q15005 226 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 PTPRRQ15256 657 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 HSF5Q4G112 596 aaPredicted RBP12.5□□□□□ -0.41
SCN1B-202ENST00000415950 IRAK1BP1Q5VVH5 260 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 FAM46CQ5VWP2 391 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 PLPP4Q5VZY2 271 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 PHYKPLQ8IUZ5 450 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 FOXRED2Q8IWF2 684 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 PEX5LQ8IYB4 626 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 C17orf50Q8WW18 174 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 MAL2Q969L2 176 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 RIPOR3Q96MK2 946 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 VRTNQ9H8Y1 702 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 PHPT1Q9NRX4 125 aaPredicted RBP12.5□□□□□ -0.41
SCN1B-202ENST00000415950 FLRT1Q9NZU1 646 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 VPS29Q9UBQ0 182 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 NUP50Q9UKX7 468 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 MAU2Q9Y6X3 613 aa12.5□□□□□ -0.41
SCN1B-202ENST00000415950 KIAA0100Q14667 2235 aaKnown RBP12.5□□□□□ -0.41
SCN1B-202ENST00000415950 STRCP1A6NGW2 1772 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 LOC100509620A0A075B734 347 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 FXYD6-FXYD2A0A087WZ82 144 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 TEX28O15482 410 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 IDSP22304 550 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 CBX5P45973 191 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 PSMD8P48556 350 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 RAB15P59190 212 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 VLDLRP98155 873 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 EMX2Q04743 252 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 SLC3A1Q07837 685 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 CBLBQ13191 982 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 RANBP10Q6VN20 620 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 CHST9Q7L1S5 443 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 SLC37A3Q8NCC5 494 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 RAB8BQ92930 207 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 KXD1Q9BQD3 176 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 FXYD6Q9H0Q3 95 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 GJD2Q9UKL4 321 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 ASGR1P07306 291 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 PRPS1L1P21108 318 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 KCNC1P48547 511 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 AP3S2P59780 193 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 ERVPABLB-1P60509 514 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 PRR5P85299 388 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 MEF2AQ02078 507 aaPredicted RBP12.49□□□□□ -0.41
SCN1B-202ENST00000415950 PON2Q15165 354 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF311Q5JNZ3 666 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 KIAA1614Q5VZ46 1190 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 BEND7Q8N7W2 519 aaPredicted RBP12.49□□□□□ -0.41
SCN1B-202ENST00000415950 OR2L5Q8NG80 312 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 RBM18Q96H35 190 aaKnown RBP12.49□□□□□ -0.41
SCN1B-202ENST00000415950 ERMAPQ96PL5 475 aaPredicted RBP12.49□□□□□ -0.41
SCN1B-202ENST00000415950 SLC35A5Q9BS91 424 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 TTTY10Q9BZA0 68 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 OR2AG1Q9H205 316 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 TMEM181Q9P2C4 612 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 CFAP20Q9Y6A4 193 aaKnown RBP12.49□□□□□ -0.41
SCN1B-202ENST00000415950 CCL16O15467 120 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 REM1O75628 298 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 RPP14O95059 124 aaKnown RBP12.49□□□□□ -0.41
SCN1B-202ENST00000415950 FPR1P21462 350 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 ZNF267Q14586 743 aaPredicted RBP12.49□□□□□ -0.41
SCN1B-202ENST00000415950 SPARTQ8N0X7 666 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 CEP76Q8TAP6 659 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 GPR151Q8TDV0 419 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 HAVCR1Q96D42 359 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 FUZQ9BT04 418 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 OR51B5Q9H339 312 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 HPF1Q9NWY4 346 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 SPATA7Q9P0W8 599 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 MED31Q9Y3C7 131 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 NHSL1Q5SYE7 1610 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 COL1A2P08123 1366 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 FAM186AA6NE01 2351 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 TLR4O00206 839 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 NARSO43776 548 aaKnown RBP12.49□□□□□ -0.41
SCN1B-202ENST00000415950 GPX3P22352 226 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 IGFBP4P22692 258 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 MLLT10P55197 1068 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 OR12D2P58182 307 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 GHRHRQ02643 423 aa12.49□□□□□ -0.41
SCN1B-202ENST00000415950 SLBPQ14493 270 aaKnown RBP eCLIP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms