RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 JUNBP17275 347 aaPredicted RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 CD247P20963 164 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 MATKP42679 507 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 CDH6P55285 790 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 NKX6-1P78426 367 aaPredicted RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 LCP2Q13094 533 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 PRKAA1Q13131 559 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 TDGQ13569 410 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 IL10RAQ13651 578 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 HYAL4Q2M3T9 481 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SLC36A3Q495N2 470 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 GPAT3Q53EU6 434 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 TMEM201Q5SNT2 666 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 TUBA3EQ6PEY2 450 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 KCTD8Q6ZWB6 473 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 STX12Q86Y82 276 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 KDM8Q8N371 416 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 ARHGEF39Q8N4T4 335 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 RDH11Q8TC12 318 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 GLMPQ8WWB7 406 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SLC9A6Q92581 669 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 TANKQ92844 425 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 ISL2Q96A47 359 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 LRCH3Q96II8 777 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SPATA13Q96N96 652 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 RNF157Q96PX1 679 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 C11orf84Q9BUA3 381 aaPredicted RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 TPPP3Q9BW30 176 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 ZBP1Q9H171 429 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 CNGB3Q9NQW8 809 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 ENTPD7Q9NQZ7 604 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 MRPL17Q9NRX2 175 aaKnown RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 CGGBP1Q9UFW8 167 aaPredicted RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SARDHQ9UL12 918 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 ZNF638Q14966 1978 aaKnown RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 LIPT2A6NK58 231 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 NRG2O14511 850 aaPredicted RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 STX16O14662 325 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 GRM6O15303 877 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 DNAJB6O75190 326 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 DDAH2O95865 285 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 MT-ATP6P00846 226 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 NTRK1P04629 796 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 HAPLN1P10915 354 aaPredicted RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 TIMP2P16035 220 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 ZNF182P17025 639 aaPredicted RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 TCN1P20061 433 aaPredicted RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 RBL1P28749 1068 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 PTPN6P29350 595 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 CDKN1BP46527 198 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 ATP12AP54707 1039 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 TAF10Q12962 218 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SNTB1Q13884 538 aaKnown RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 CAMK1Q14012 370 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 CEBPEQ15744 281 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SAMD4BQ5PRF9 694 aaKnown RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 KCTD9Q7L273 389 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 TAC4Q86UU9 113 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SNX31Q8N9S9 440 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 OR13F1Q8NGS4 319 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SP7Q8TDD2 431 aaPredicted RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 LPGAT1Q92604 370 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 HPS1Q92902 700 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 ZDHHC12Q96GR4 267 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 MAGED4Q96JG8 741 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 CPNE1Q99829 537 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SNRNP25Q9BV90 132 aaKnown RBP9.07□□□□□ -0.96
SNHG3-201ENST00000413987 BBS2Q9BXC9 721 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 TRIM15Q9C019 465 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 DDIT4Q9NX09 232 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 SH3BP4Q9P0V3 963 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 MFHAS1Q9Y4C4 1052 aa9.07□□□□□ -0.96
SNHG3-201ENST00000413987 DOCK6Q96HP0 2047 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 TCAF2A6NFQ2 919 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 TRIM24O15164 1050 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 GMNNO75496 209 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 RSL1D1O76021 490 aaKnown RBP9.06□□□□□ -0.96
SNHG3-201ENST00000413987 CXCL14O95715 111 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 CPNE6O95741 557 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 CHEK2O96017 543 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 IGHEP01854 428 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 PCCBP05166 539 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 UROSP10746 265 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 MTHFD2P13995 350 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 PGAM1P18669 254 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 TRHRP34981 398 aaPredicted RBP9.06□□□□□ -0.96
SNHG3-201ENST00000413987 MAGEA12P43365 314 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 HLCSP50747 726 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 GNA12Q03113 381 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 SCAPQ12770 1279 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 DMC1Q14565 340 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 UGT8Q16880 541 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 SLC25A52Q3SY17 297 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 SLC9A4Q6AI14 798 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 HMBOX1Q6NT76 420 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 ZNF534Q76KX8 674 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 RNF44Q7L0R7 432 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 RBM23Q86U06 439 aaKnown RBP9.06□□□□□ -0.96
SNHG3-201ENST00000413987 PLD5Q8N7P1 536 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms