RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FAM86B1E9PN63 330 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 FLRT2O43155 660 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 ZNF500O60304 480 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 FCGR3BO75015 233 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 CEACAM4O75871 244 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 PGLSO95336 258 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 FAM86B2P0C5J1 330 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 TSPY3P0CV98 308 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 TSPY8P0CW00 308 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 F3P13726 295 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 CASTP20810 708 aaKnown RBP3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 SFTPDP35247 375 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 OPRL1P41146 370 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 HUNKP57058 714 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 RBP5P82980 135 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 CYCSP99999 105 aaKnown RBP3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 TSPY1Q01534 308 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 BFSP1Q12934 665 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 TRA2AQ13595 282 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 ZNF613Q6PF04 617 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 PRSS55Q6UWB4 352 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 ZNF497Q6ZNH5 498 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 TMEM182Q6ZP80 229 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 PHLDB2Q86SQ0 1253 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 APCDD1Q8J025 514 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 LRTM2Q8N967 370 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 OR5T2Q8NGG2 359 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 OR6S1Q8NH40 331 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 CORO2AQ92828 525 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 SPATA17Q96L03 361 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 USP28Q96RU2 1077 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 CDK19Q9BWU1 502 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 RIMS4Q9H426 269 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 EGLN3Q9H6Z9 239 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 IARS2Q9NSE4 1012 aaKnown RBP3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 PRSS21Q9Y6M0 314 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 FANCAO15360 1455 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 A2MP01023 1474 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 UHRF1BP1Q6BDS2 1440 aa3.26□□□□□ -1.89
HMGB1P11-201ENST00000413899 KIF15Q9NS87 1388 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 UGGT1Q9NYU2 1555 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 ARHGEF28Q8N1W1 1705 aaKnown RBP3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 ARHGEF37A1IGU5 675 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 MPTX1A8MV57 137 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 SLC30A4O14863 429 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 PPIP5K2O43314 1243 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 DCXO43602 365 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 CLDN1O95832 211 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 SERPINB2P05120 415 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 YES1P07947 543 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 VIMP08670 466 aaKnown RBP3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 STAG3L1P0CL83 205 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 PRKAR1AP10644 381 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 ALDH1B1P30837 517 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 OR1D5P58170 312 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 DCDC1P59894 354 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 SCN1BQ07699 218 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 IL10RBQ08334 325 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 DRP2Q13474 957 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 SCARB2Q14108 478 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 BSPRYQ5W0U4 402 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 CAVIN1Q6NZI2 390 aaKnown RBP3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 PET117Q6UWS5 81 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 BTNL8Q6UX41 500 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 SLC24A5Q71RS6 500 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 C4orf19Q8IY42 314 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 PRSS35Q8N3Z0 413 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 MAPK1IP1LQ8NDC0 245 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 NCOA7Q8NI08 942 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 ST6GALNAC6Q969X2 333 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 ZNF486Q96H40 463 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 ZNF599Q96NL3 588 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 INTS14Q96SY0 518 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 SYT11Q9BT88 431 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 PI4K2AQ9BTU6 479 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 NYXQ9GZU5 481 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 WWTR1Q9GZV5 400 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 HOXD1Q9GZZ0 328 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 MED20Q9H944 212 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 PHPT1Q9NRX4 125 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 TBC1D13Q9NVG8 400 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 FBXL4Q9UKA2 621 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 KLK4Q9Y5K2 254 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 SELENOKQ9Y6D0 94 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 SPATA31E1Q6ZUB1 1445 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 POGZQ7Z3K3 1410 aa3.25□□□□□ -1.89
HMGB1P11-201ENST00000413899 ADGRL1O94910 1474 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 ZNF518AQ6AHZ1 1483 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 TRAV34A0A0B4J273 112 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 IFIT3O14879 490 aaKnown RBP3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 MAGEC1O60732 1142 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 RPN1P04843 607 aaKnown RBP3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 MYOGP15173 224 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 DPEP1P16444 411 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 AADACP22760 399 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 PSMB4P28070 264 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 DUTP33316 252 aaKnown RBP3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 MMP12P39900 470 aa3.24□□□□□ -1.89
HMGB1P11-201ENST00000413899 SOX3P41225 446 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms