RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 PRPS2P11908 318 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 TCN1P20061 433 aaPredicted RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 PEX2P28328 305 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 CLNS1AP54105 237 aaKnown RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 HMGCS1Q01581 520 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 KIAA0040Q15053 153 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 AGERQ15109 404 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 CST6Q15828 149 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 FXNQ16595 210 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 PAGE3Q5JUK9 113 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 AGTRAPQ6RW13 159 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 XKR5Q6UX68 686 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 PTRH1Q86Y79 214 aaKnown RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 TRAPPC5Q8IUR0 188 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 AADATQ8N5Z0 425 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 SELENOMQ8WWX9 145 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 METTL2AQ96IZ6 378 aaKnown RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 FCRL1Q96LA6 429 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 LRGUKQ96M69 825 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 OR2AG1Q9H205 316 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 DPEP2Q9H4A9 486 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 FARSBQ9NSD9 589 aaKnown RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 K7ESM1 405 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 RNASEH1O60930 286 aaKnown RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 HSD3B1P14060 373 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 HSD3B2P26439 372 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 PBLDP30039 288 aaPredicted RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 SLC7A1P30825 629 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 DRD3P35462 400 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 MSX2P35548 267 aaPredicted RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 HNF4AP41235 474 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 BDKRB1P46663 353 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 ABRQ12979 859 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 SRSF6Q13247 344 aaKnown RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 E2F2Q14209 437 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 CAPRIN1Q14444 709 aaKnown RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 CPSF6Q16630 551 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 FRG2Q64ET8 278 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 GRHL2Q6ISB3 625 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 THOC6Q86W42 341 aaKnown RBP16.45■□□□□ 0.22
PTPRC-206ENST00000413409 LIX1Q8N485 282 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 ADCY4Q8NFM4 1077 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 DNAJB8Q8NHS0 232 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 SLC45A3Q96JT2 553 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 BTBD9Q96Q07 612 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 FRG2BQ96QU4 278 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 EFHD1Q9BUP0 239 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 DPY30Q9C005 99 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 PCDHAC1Q9H158 963 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 IL1RL2Q9HB29 575 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 ACTR3BQ9P1U1 418 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 ATXN10Q9UBB4 475 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 GULP1Q9UBP9 304 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 FZD4Q9ULV1 537 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 SLC22A14Q9Y267 594 aa16.45■□□□□ 0.22
PTPRC-206ENST00000413409 DOPEY1Q5JWR5 2465 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 DOCK9Q9BZ29 2069 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 SEC22BO75396 215 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 IL6P05231 212 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 ATP6V1B2P21281 511 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 C5AR1P21730 350 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 IMPA1P29218 277 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 HALP42357 657 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 CASP2P42575 452 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 HNRNPFP52597 415 aaKnown RBP16.44■□□□□ 0.22
PTPRC-206ENST00000413409 ADPRHP54922 357 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 IRF8Q02556 426 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 RPA4Q13156 261 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 CHIT1Q13231 466 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 PWP1Q13610 501 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 C10orf62Q5T681 223 aaPredicted RBP16.44■□□□□ 0.22
PTPRC-206ENST00000413409 AGBL4Q5VU57 503 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 UNC5DQ6UXZ4 953 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 MSANTD1Q6ZTZ1 278 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 TRIM74Q86UV6 250 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 TICAM1Q8IUC6 712 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 HID1Q8IV36 788 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 LILRA3Q8N6C8 439 aaPredicted RBP16.44■□□□□ 0.22
PTPRC-206ENST00000413409 OR8J3Q8NGG0 315 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 OR2L2Q8NH16 312 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 SLC13A3Q8WWT9 602 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 PYCR2Q96C36 320 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 APOLD1Q96LR9 279 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 PKP4Q99569 1192 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 ARHGAP9Q9BRR9 750 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 ATG10Q9H0Y0 220 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 ATXN7L1Q9ULK2 861 aaPredicted RBP16.44■□□□□ 0.22
PTPRC-206ENST00000413409 CA5BQ9Y2D0 317 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 AP3M1Q9Y2T2 418 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 DTNAQ9Y4J8 743 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 PCDHGA8Q9Y5G5 932 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 ENTPD2Q9Y5L3 495 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 SNX13Q9Y5W8 968 aa16.44■□□□□ 0.22
PTPRC-206ENST00000413409 KLHL33A6NCF5 533 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 MGAT4DA6NG13 374 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 GPR89AB7ZAQ6 455 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 H0YIV9 168 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 CLGNO14967 610 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 PRAMEF4O60810 478 aa16.43■□□□□ 0.22
PTPRC-206ENST00000413409 C1orf105O95561 183 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms