RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 XKR6Q5GH73 641 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 MRGPREQ86SM8 312 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 GSPT2Q8IYD1 628 aaKnown RBP13.55□□□□□ -0.24
HDDC2-202ENST00000398153 PLD6Q8N2A8 252 aaKnown RBP13.55□□□□□ -0.24
HDDC2-202ENST00000398153 AMER3Q8N944 861 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 EXD3Q8N9H8 876 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 SNX31Q8N9S9 440 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 ANKRD53Q8N9V6 530 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 KCT2Q8NC54 265 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 ZNF740Q8NDX6 193 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.55□□□□□ -0.24
HDDC2-202ENST00000398153 EXT2Q93063 718 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 SLC6A16Q9GZN6 736 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 ING2Q9H160 280 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 SLC25A18Q9H1K4 315 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 MRPL46Q9H2W6 279 aaKnown RBP13.55□□□□□ -0.24
HDDC2-202ENST00000398153 RHBGQ9H310 441 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 ACSS2Q9NR19 701 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 TRPC4Q9UBN4 977 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 CTSFQ9UBX1 484 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 ADGRE2Q9UHX3 823 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 G3BP2Q9UN86 482 aaKnown RBP13.55□□□□□ -0.24
HDDC2-202ENST00000398153 PCDHGB7Q9Y5F8 929 aa13.55□□□□□ -0.24
HDDC2-202ENST00000398153 ANKDD1BA6NHY2 528 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 AGPSO00116 658 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 SMIM24O75264 130 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 FAM87AP0C7U9 286 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 VARSP26640 1264 aaKnown RBP13.54□□□□□ -0.24
HDDC2-202ENST00000398153 OTX2P32243 289 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 GMPRP36959 345 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 HNF4AP41235 474 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 SOX8P57073 446 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 VSNL1P62760 191 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 KLC1Q07866 573 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 CHIT1Q13231 466 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 DOC2AQ14183 400 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 LY6DQ14210 128 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 SLBPQ14493 270 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDDC2-202ENST00000398153 LIPJQ5W064 366 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 METTL27Q8N6F8 245 aaPredicted RBP13.54□□□□□ -0.24
HDDC2-202ENST00000398153 CREB3L4Q8TEY5 395 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 ESAMQ96AP7 390 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 OR1F2PQ96R84 312 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 SPNS1Q9H2V7 528 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 DCDC2Q9UHG0 476 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 RALYQ9UKM9 306 aaKnown RBP13.54□□□□□ -0.24
HDDC2-202ENST00000398153 TSC22D4Q9Y3Q8 395 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 ANGPTL3Q9Y5C1 460 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 PCDHGA9Q9Y5G4 932 aaKnown RBP13.54□□□□□ -0.24
HDDC2-202ENST00000398153 CCDC88CQ9P219 2028 aa13.54□□□□□ -0.24
HDDC2-202ENST00000398153 CACNA1GO43497 2377 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 PIEZO2Q9H5I5 2752 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 A0A088AWK7 358 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 A0A1W2PQ72 361 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 GALR3O60755 368 aaPredicted RBP13.53□□□□□ -0.24
HDDC2-202ENST00000398153 CDH16O75309 829 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 CEACAM4O75871 244 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 NUDT17P0C025 328 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 SMIM10L1P0DMW3 83 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 EPORP19235 508 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 ZNF10P21506 573 aaPredicted RBP13.53□□□□□ -0.24
HDDC2-202ENST00000398153 AGTR2P50052 363 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 DCAF10Q5QP82 559 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 TCTN3Q6NUS6 607 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 PPP1R32Q7Z5V6 425 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 HPS6Q86YV9 775 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 LAS2Q8IYD9 372 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 CLEC1AQ8NC01 280 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 OR9A4Q8NGU2 314 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 C9orf43Q8TAL5 461 aaPredicted RBP13.53□□□□□ -0.24
HDDC2-202ENST00000398153 UTP15Q8TED0 518 aaKnown RBP13.53□□□□□ -0.24
HDDC2-202ENST00000398153 CAVIN3Q969G5 261 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 SMIM10Q96HG1 83 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 SCYL1Q96KG9 808 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 CRB3Q9BUF7 120 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 SOX17Q9H6I2 414 aaPredicted RBP13.53□□□□□ -0.24
HDDC2-202ENST00000398153 P4HTMQ9NXG6 502 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 XPR1Q9UBH6 696 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 MRPS2Q9Y399 296 aaKnown RBP13.53□□□□□ -0.24
HDDC2-202ENST00000398153 NAALAD2Q9Y3Q0 740 aa13.53□□□□□ -0.24
HDDC2-202ENST00000398153 LRIT2A6NDA9 550 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 ARGFXA6NJG6 315 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 IDSB3KWA1 339 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 KLHL18O94889 574 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 BMP10O95393 424 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 SERPIND1P05546 499 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 IL1RNP18510 177 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 TAC1P20366 129 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 HSD17B3P37058 310 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 EMP2P54851 167 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 TGM3Q08188 693 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 C19orf57Q0VDD7 668 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 HYAL2Q12891 473 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 ATP1A4Q13733 1029 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 RBBP7Q16576 425 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 ADPRMQ3LIE5 342 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 FBXO48Q5FWF7 155 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 VWA2Q5GFL6 755 aa13.52□□□□□ -0.25
HDDC2-202ENST00000398153 C10orf62Q5T681 223 aaPredicted RBP13.52□□□□□ -0.25
HDDC2-202ENST00000398153 FAM69BQ5VUD6 431 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms