RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SLBPQ14493 270 aaKnown RBP eCLIP18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 PAGE2BQ5JRK9 111 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 BLOC1S3Q6QNY0 202 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 TRIM46Q7Z4K8 759 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 RBM12BQ8IXT5 1001 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 ADGRF3Q8IZF5 1079 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 RBM38Q9H0Z9 239 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 PCDHGA11Q9Y5H2 935 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 SNX13Q9Y5W8 968 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 SDK1Q7Z5N4 2213 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 FANCMQ8IYD8 2048 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 C7orf72A4D263 438 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 BTN3A3O00478 584 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 NR5A2O00482 541 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 CFIP05156 583 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 PEBP1P30086 187 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 RXRGP48443 463 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 MEF2AQ02078 507 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 LAPTM5Q13571 262 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 RPS6KA2Q15349 733 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 HIST2H2ACQ16777 129 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 DUOXA1Q1HG43 343 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 HIST2H2AA3Q6FI13 130 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 MED27Q6P2C8 311 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 B3GNT6Q6ZMB0 384 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 TMEM26Q6ZUK4 368 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 SLC15A3Q8IY34 581 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 ARL14Q8N4G2 192 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 WDR20Q8TBZ3 569 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 PRPF18Q99633 342 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 ANKRD60Q9BZ19 345 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 PELI2Q9HAT8 420 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 SLC52A3Q9NQ40 469 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 PNPLA3Q9NST1 481 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 CUEDC1Q9NWM3 386 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 GPR45Q9Y5Y3 372 aa18.54■□□□□ 0.56
PDLIM2-204ENST00000397760 TTC28Q96AY4 2481 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 ISM1B1AKI9 464 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 NME4O00746 187 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 RGS14O43566 566 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 NOBOXO60393 691 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 FCGR1AP12314 374 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 IL10P22301 178 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 HOXD12P35452 270 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 TUBA4AP68366 448 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 NR6A1Q15406 480 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 SHBQ15464 509 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 SF1Q15637 639 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 IMPG1Q17R60 797 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 NADK2Q4G0N4 442 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 FAM129CQ86XR2 697 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 AVL9Q8NBF6 648 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 ABHD11Q8NFV4 315 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 OR7G3Q8NG95 312 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 SPNS1Q9H2V7 528 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 FSCN3Q9NQT6 498 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 CCL27Q9Y4X3 112 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 CSNK1G3Q9Y6M4 447 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 A0A1W2PP18 115 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 PIPSLA2A3N6 862 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 OR6C74A6NCV1 312 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 H7BY64 318 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 FXYD1O00168 92 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 H6PDO95479 791 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 GPIP06744 558 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 PCNAP12004 261 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 CAPN3P20807 821 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 CCR8P51685 355 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 HMGCS1Q01581 520 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 ZNF33BQ06732 778 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 LPAL2Q16609 132 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 ATP6AP1LQ52LC2 224 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 HMBOX1Q6NT76 420 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 OGFOD3Q6PK18 319 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 ZBTB49Q6ZSB9 765 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 RABEPKQ7Z6M1 372 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 ZNF761Q86XN6 746 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 PTRH1Q86Y79 214 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 SLC25A45Q8N413 288 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 CEP76Q8TAP6 659 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 SLC22A18Q96BI1 424 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 LRRC58Q96CX6 371 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 REPS1Q96D71 796 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 PRAP1Q96NZ9 151 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 ACPTQ9BZG2 426 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 BRINP2Q9C0B6 783 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 MRPS30Q9NP92 439 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 AIG1Q9NVV5 245 aa18.53■□□□□ 0.56
PDLIM2-204ENST00000397760 TDRD6O60522 2096 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 SERTM1A2A2V5 107 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 FAM221BA6H8Z2 402 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 LSM1O15116 133 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 CCNDBP1O95273 360 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 ZNF23P17027 643 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 SLC6A2P23975 617 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 GRIA3P42263 894 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 FASLGP48023 281 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 ABATP80404 500 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 RCAN2Q14206 197 aa18.52■□□□□ 0.56
PDLIM2-204ENST00000397760 KIR2DS3Q14952 304 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms