RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PCDHGA2Q9Y5H1 932 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 A0A0C4DFX4 3053 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 PCDH7O60245 1069 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 CTSVO60911 334 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 SP9P0CG40 484 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 PRPS1L1P21108 318 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 ARFIP1P53367 373 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 CLNS1AP54105 237 aaKnown RBP12.15□□□□□ -0.46
TRIM39-204ENST00000396548 PSME3P61289 254 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 FOXM1Q08050 763 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 ART3Q13508 389 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 CEACAM7Q14002 265 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 NR1D2Q14995 579 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 FAM174BQ3ZCQ3 159 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 C14orf28Q4W4Y0 310 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 CYB5D1Q6P9G0 228 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 NT5CQ8TCD5 201 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 WDR60Q8WVS4 1066 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 GTF2H4Q92759 462 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 MCUR1Q96AQ8 359 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 LRRC58Q96CX6 371 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 PPM1MQ96MI6 270 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 OR2A5Q96R48 311 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 SLC6A16Q9GZN6 736 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 HRASLS2Q9NWW9 162 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 PCDHA9Q9Y5H5 950 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 ADAMTS9Q9P2N4 1935 aa12.15□□□□□ -0.46
TRIM39-204ENST00000396548 TRBV5-3A0A0A0MS03 114 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 ANGPT2O15123 496 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 PGRP06401 933 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 ANXA4P09525 319 aaPredicted RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 PTPN6P29350 595 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 CYP4F2P78329 520 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 RIPK1Q13546 671 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 PDE7AQ13946 482 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 MMEL1Q495T6 779 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 SYT12Q8IV01 421 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 PCYOX1LQ8NBM8 494 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 BAHD1Q8TBE0 780 aaPredicted RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 COQ8BQ96D53 544 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 HOPXQ9BPY8 73 aaPredicted RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 SORBS1Q9BX66 1292 aaKnown RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 KLHL31Q9H511 634 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 CAPN10Q9HC96 672 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 MYNNQ9NPC7 610 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 ZSCAN32Q9NX65 697 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 MAN2B2Q9Y2E5 1009 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 BTBD3Q9Y2F9 522 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 CFLARO15519 480 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 UBXN7O94888 489 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 ANXA6P08133 673 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 GNSP15586 552 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 RPS15AP62244 130 aaKnown RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 FAM71E1Q6IPT2 247 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 MSANTD1Q6ZTZ1 278 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 RNF44Q7L0R7 432 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 KIAA2013Q8IYS2 634 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 EFCAB3Q8N7B9 438 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 OR8J2Q8NGG1 315 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 OR10G6Q8NH81 332 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 C16orf78Q8WTQ4 265 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 SLC13A3Q8WWT9 602 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 MS4A6EQ96DS6 147 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 CDRT15Q96T59 188 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 SLC39A3Q9BRY0 314 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 ABCG4Q9H172 646 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 DDX31Q9H8H2 851 aaKnown RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 ATP6V1HQ9UI12 483 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 ADAM29Q9UKF5 820 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 CROTQ9UKG9 612 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 ERVK-11Q9UQG0 969 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 A0A0J9YY10 115 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 SCAMP2O15127 329 aaKnown RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 NDUFS4O43181 175 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 MAGP20916 626 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 SLC6A2P23975 617 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 SNRPNP63162 240 aaKnown RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 ZNF763Q0D2J5 394 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 PRSS53Q2L4Q9 553 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 TRMT5Q32P41 509 aaKnown RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 TMEM35AQ53FP2 167 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 FIGLAQ6QHK4 219 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 BNC2Q6ZN30 1099 aaPredicted RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 NET1Q7Z628 596 aaPredicted RBP12.14□□□□□ -0.47
TRIM39-204ENST00000396548 HPS6Q86YV9 775 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 MSRB3Q8IXL7 192 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 ARHGAP24Q8N264 748 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 RAB33BQ9H082 229 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 SUSD2Q9UGT4 822 aa12.14□□□□□ -0.47
TRIM39-204ENST00000396548 A0A0A6YYD5 115 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 A0A1B0GTQ1 180 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 GSAPA4D1B5 854 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 MAP3K7O43318 606 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 SMIM10L1P0DMW3 83 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 HOXD12P35452 270 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 GRK3P35626 688 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 ASMTP46597 345 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 CAPZBP47756 277 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 WASHC2DQ5SRD0 308 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 OOSP2Q86WS3 158 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms