RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 AGKQ53H12 422 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 SNAP47Q5SQN1 464 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 C1orf146Q5VVC0 180 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 GTF2H2CQ6P1K8 395 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 LETMD1Q6P1Q0 360 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 UBE2R2Q712K3 238 aaPredicted RBP16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 SPATA19Q7Z5L4 167 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 BEND7Q8N7W2 519 aaPredicted RBP16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 OR52B6Q8NGF0 335 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 STMN2Q93045 179 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 SH3KBP1Q96B97 665 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 CD244Q9BZW8 370 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 NOL11Q9H8H0 719 aaKnown RBP16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 TIMM22Q9Y584 194 aa16.78■□□□□ 0.28
TNFSF13-205ENST00000396545 KIR2DS5A0A0G2JLQ3 304 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 A0A0G2JNG1 304 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 A8MU76 341 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 KIR2DS3K7RE56 304 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 PSIP1O75475 530 aaKnown RBP16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 POP7O75817 140 aaKnown RBP16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 SNRPB2P08579 225 aaKnown RBP16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 LINC00032P0C843 101 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 PIK3CGP48736 1102 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 HSPA7P48741 367 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 PPM1FP49593 454 aaPredicted RBP16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 STX1BP61266 288 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 TRAF3Q13114 568 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 GRB7Q14451 532 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 KIR2DS5Q14953 304 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 GSTA3Q16772 222 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 RNF165Q6ZSG1 346 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 SLC9B2Q86UD5 537 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 AMZ2Q86W34 360 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 FBXO15Q8NCQ5 510 aaPredicted RBP16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 SKA2Q8WVK7 121 aaPredicted RBP16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 NCSTNQ92542 709 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 TUBGCP3Q96CW5 907 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 SLC25A23Q9BV35 468 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 FBXO8Q9NRD0 319 aa16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 STX18Q9P2W9 335 aaKnown RBP16.77■□□□□ 0.28
TNFSF13-205ENST00000396545 FBP2O00757 339 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 PDE5AO76074 875 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 ANP32DO95626 131 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 GUCA1CO95843 209 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 OTCP00480 354 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 CATP04040 527 aaKnown RBP16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 SLC2A4P14672 509 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 MAP4P27816 1152 aaKnown RBP16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 GGT5P36269 586 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 POLE2P56282 527 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 ART3Q13508 389 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 RCN1Q15293 331 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 AAGABQ6PD74 315 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 BNC2Q6ZN30 1099 aaPredicted RBP16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 ZNF547Q8IVP9 402 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 NLGN4XQ8N0W4 816 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 NLGN4YQ8NFZ3 816 aaPredicted RBP16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 JADE3Q92613 823 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 SLC45A3Q96JT2 553 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 SERPINI1Q99574 410 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 CTRCQ99895 268 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 EGFL8Q99944 293 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 EPB41L1Q9H4G0 881 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 WDR41Q9HAD4 459 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 SDR39U1Q9NRG7 319 aaPredicted RBP16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 WWOXQ9NZC7 414 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 CCDC167Q9P0B6 97 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 CPNE7Q9UBL6 633 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 POMPQ9Y244 141 aa16.77■□□□□ 0.27
TNFSF13-205ENST00000396545 LRRK2Q5S007 2527 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 OR5K4A6NMS3 321 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 ZNF891A8MT65 544 aaPredicted RBP16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 H0Y3Z8 333 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 K7EPI3 171 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 CAPN5O15484 640 aaPredicted RBP16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 FKBP6O75344 327 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 CLCNKAP51800 687 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 UBE2IP63279 158 aaKnown RBP16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 DMPKQ09013 629 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 PIGGQ5H8A4 983 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 REP15Q6BDI9 236 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 CEACAM20Q6UY09 585 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 HACD2Q6Y1H2 254 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 C11orf96Q7Z7L8 435 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 HPS6Q86YV9 775 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 VRK3Q8IV63 474 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 FUNDC1Q8IVP5 155 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 CFAP206Q8IYR0 622 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 CDYL2Q8N8U2 506 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 AVL9Q8NBF6 648 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 OR4F6Q8NGB9 312 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 ATL1Q8WXF7 558 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 NPAS2Q99743 824 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 ZPBPQ9BS86 351 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 TIMM29Q9BSF4 260 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 MRPL1Q9BYD6 325 aaKnown RBP16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 IPPKQ9H8X2 491 aa16.76■□□□□ 0.27
TNFSF13-205ENST00000396545 PRDM8Q9NQV8 689 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms