RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 POLR2J3Q9H1A7 115 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 ACOT13Q9NPJ3 140 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 SNTG1Q9NSN8 517 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 ELOVL2Q9NXB9 296 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 BACE2Q9Y5Z0 518 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 TTC3P53804 2025 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 AP2A2O94973 939 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 ADH1AP07327 375 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 AMD1P17707 334 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 LAG3P18627 525 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 TACR1P25103 407 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 TIA1P31483 386 aaKnown RBP eCLIP11.26□□□□□ -0.617e-7■■■□□ 15.5
UBE2D3-209ENST00000394804 VIPR1P32241 457 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 PPM1AP35813 382 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 ISL1P61371 349 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 GNA13Q14344 377 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 BHLHB9Q6PI77 547 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 CRTC1Q6UUV9 634 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 GATAD2AQ86YP4 633 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 TEX47Q8TBZ9 253 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 UBTD2Q8WUN7 234 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 XAGE5Q8WWM1 108 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 DPF3Q92784 378 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 SCAMP4Q969E2 229 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 SCRN2Q96FV2 425 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 PKP4Q99569 1192 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 REEP4Q9H6H4 257 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 NTN4Q9HB63 628 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 CPNE5Q9HCH3 593 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 KLHL42Q9P2K6 505 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 ZNF225Q9UK10 706 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 RPL36Q9Y3U8 105 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 INSL5Q9Y5Q6 135 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 HTTP42858 3142 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 SLC9A3R1O14745 358 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 SCAMP2O15127 329 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 TAPBPO15533 448 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 KLKB1P03952 638 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 PAICSP22234 425 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 GADD45AP24522 165 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 CAP1Q01518 475 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 MXD1Q05195 221 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 TAB1Q15750 504 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 FNDC3BQ53EP0 1204 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 Q6ZVL8 140 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 NANOGNBQ7Z5D8 188 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 GPR26Q8NDV2 337 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 KLHL6Q8WZ60 621 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 MYEOVQ96EZ4 313 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 DIRAS2Q96HU8 199 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 ALPK1Q96QP1 1244 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 MBOAT4Q96T53 435 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 HDHD2Q9H0R4 259 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 ITM2CQ9NQX7 267 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 MS4A12Q9NXJ0 267 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 STMN3Q9NZ72 180 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 SPATA7Q9P0W8 599 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 RLFQ13129 1914 aa11.26□□□□□ -0.61
UBE2D3-209ENST00000394804 IRGMA1A4Y4 181 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 NPIPB15A6NHN6 443 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 TLR4O00206 839 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 PI15O43692 258 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 GUCY1B2O75343 617 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 NME6O75414 186 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 GBAP04062 536 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 CD72P21854 359 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 GTF2E2P29084 291 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 BUD31P41223 144 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 PREPP48147 710 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 NRIP1P48552 1158 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 RPS3AP61247 264 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 ZNF33BQ06732 778 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 ZNF367Q7RTV3 350 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 ZNF683Q8IZ20 524 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 C2orf73Q8N5S3 287 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 FAM129BQ96TA1 746 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 WRAP53Q9BUR4 548 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 MROQ9BYG7 248 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 LYVE1Q9Y5Y7 322 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 RORCP51449 518 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 RPS7P62081 194 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 HEPACAMQ14CZ8 416 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 SNAPC1Q16533 368 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 SMN1Q16637 294 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 EXOC3L2Q2M3D2 409 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 CTU2Q2VPK5 515 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 CBLL1Q75N03 491 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 EXOSC8Q96B26 276 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 SLC30A2Q9BRI3 323 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 CCM2Q9BSQ5 444 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 KLF16Q9BXK1 252 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 ASIC5Q9NY37 505 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 A0A1W2PRU2 124 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 CLCA1A8K7I4 914 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 CCRL2O00421 344 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 ADAMTS4O75173 837 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 SGSHP51688 502 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 HSPB3Q12988 150 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 FADDQ13158 208 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms