RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 IL37Q9NZH6 218 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 BTNL2Q9UIR0 455 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 OSGIN1Q9UJX0 560 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 A0A1B0GVI7 797 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 TRBC2A0A5B9 178 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 C12orf71A8MTZ7 269 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ONECUT3O60422 494 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 MITFO75030 526 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 F2P00734 622 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ACPPP15309 386 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ATF4P18848 351 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 TNNI3P19429 210 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 F8A1P23610 371 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 NKX2-5P52952 324 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 DCDC1P59894 354 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 LGALS3BPQ08380 585 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 SUZ12Q15022 739 aaKnown RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 KDM4DQ6B0I6 523 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 GTF2IRD2BQ6EKJ0 949 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 LETMD1Q6P1Q0 360 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 DSG4Q86SJ6 1040 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 GTF2IRD2Q86UP8 949 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 AMIGO1Q86WK6 493 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ANGPTL6Q8NI99 470 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 DEDD2Q8WXF8 326 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 PGLYRP2Q96PD5 576 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 GFM1Q96RP9 751 aaKnown RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 CPPED1Q9BRF8 314 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 C16orf70Q9BSU1 422 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 MED11Q9P086 117 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 SPACA6W5XKT8 324 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 WNK3Q9BYP7 1800 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 PCDH7O60245 1069 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 WBP4O75554 376 aaKnown RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 IQCF3P0C7M6 154 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 PRG2P13727 222 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 SMPD1P17405 629 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ITPKAP23677 461 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 TAS2R43P59537 309 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ACVR1Q04771 509 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 HNRNPA0Q13151 305 aaKnown RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 MICAQ29983 383 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ZNF311Q5JNZ3 666 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 PLEKHS1Q5SXH7 462 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 SLC36A4Q6YBV0 504 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 RASSF6Q6ZTQ3 369 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 CREB3L2Q70SY1 520 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 DNAJC22Q8N4W6 341 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ZNF300Q96RE9 604 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 FAM129BQ96TA1 746 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 HOXD1Q9GZZ0 328 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 NEUROD4Q9HD90 331 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ERVK13-1Q9NX77 482 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 RBPJLQ9UBG7 517 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 GLS2Q9UI32 602 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 SLC45A1Q9Y2W3 748 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 IRAK3Q9Y616 596 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ZFP37Q9Y6Q3 630 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 SLC9A3R1O14745 358 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 TBL1XO60907 577 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ATG13O75143 517 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 S100A9P06702 114 aaKnown RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 NUDT1P36639 197 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 PGGT1BP53609 377 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 TAS2R41P59536 307 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 SF3A2Q15428 464 aaKnown RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 CTF1Q16619 201 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 TIGD3Q6B0B8 471 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 Q8N402 240 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 CD200R1Q8TD46 325 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 LPPQ93052 612 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 FEVQ99581 238 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 EBPLQ9BY08 206 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 BHLHE41Q9C0J9 482 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 CD93Q9NPY3 652 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 ABCB8Q9NUT2 735 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 TVP23BQ9NYZ1 205 aa8.33□□□□□ -1.08
GABRA1-202ENST00000393943 KIAA1522Q9P206 1035 aaPredicted RBP8.33□□□□□ -1.08
GABRA1-202ENST00000393943 TREHO43280 583 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 ACADMP11310 421 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 M6PRP20645 277 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 TAF1CQ15572 869 aaPredicted RBP8.32□□□□□ -1.08
GABRA1-202ENST00000393943 REEP3Q6NUK4 255 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 C14orf80Q86SX3 495 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 TEX26Q8N6G2 289 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 CLDN22Q8N7P3 220 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 TOR1AIP2Q8NFQ8 470 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 MBOAT4Q96T53 435 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 MGME1Q9BQP7 344 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 A0A1W2PRB8 838 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 TRIM64A6NGJ6 449 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 TTC34A8MYJ7 566 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 ANKRD28O15084 1053 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 IFNGP01579 166 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 SERPIND1P05546 499 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 HOXD8P13378 290 aaPredicted RBP8.32□□□□□ -1.08
GABRA1-202ENST00000393943 CPN2P22792 545 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 TARDBPQ13148 414 aaKnown RBP eCLIP8.32□□□□□ -1.08
GABRA1-202ENST00000393943 MAP2K5Q13163 448 aa8.32□□□□□ -1.08
GABRA1-202ENST00000393943 BCL2A1Q16548 175 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms