RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 UTP4Q969X6 686 aaKnown RBP13□□□□□ -0.33
PTN-202ENST00000393083 CMTM7Q96FZ5 175 aa13□□□□□ -0.33
PTN-202ENST00000393083 SLC45A3Q96JT2 553 aa13□□□□□ -0.33
PTN-202ENST00000393083 MTERF1Q99551 399 aaKnown RBP13□□□□□ -0.33
PTN-202ENST00000393083 SLC25A23Q9BV35 468 aa13□□□□□ -0.33
PTN-202ENST00000393083 SPNS1Q9H2V7 528 aa13□□□□□ -0.33
PTN-202ENST00000393083 ZIM2Q9NZV7 527 aa13□□□□□ -0.33
PTN-202ENST00000393083 MDC1Q14676 2089 aaKnown RBP13□□□□□ -0.33
PTN-202ENST00000393083 C9JVG2 144 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 NPIPB8E9PQR5 432 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 GSC2O15499 205 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 CPNE6O95741 557 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 G6PDP11413 515 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 HOXB3P14651 431 aaPredicted RBP12.99□□□□□ -0.33
PTN-202ENST00000393083 ITGAXP20702 1163 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 CSF2RBP32927 897 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 TARDBPQ13148 414 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTN-202ENST00000393083 CAMK2BQ13554 666 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 ISXQ2M1V0 245 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 ICE2Q659A1 982 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 REP15Q6BDI9 236 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 ADNP2Q6IQ32 1131 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 FUNDC1Q8IVP5 155 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 LAS2Q8IYD9 372 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 KRT78Q8N1N4 520 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 ARHGAP24Q8N264 748 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 OR10G6Q8NH81 332 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 HUS1BQ8NHY5 278 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 LCN9Q8WX39 176 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 UBE2E3Q969T4 207 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 NPAS2Q99743 824 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 NUDT22Q9BRQ3 303 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 SYNDIG1Q9H7V2 258 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 BRF2Q9HAW0 419 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 CUEDC1Q9NWM3 386 aaPredicted RBP12.99□□□□□ -0.33
PTN-202ENST00000393083 ASIC5Q9NY37 505 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 NEUROG3Q9Y4Z2 214 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 PCDHB11Q9Y5F2 797 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 KNTC1P50748 2209 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 UNC13CQ8NB66 2214 aa12.99□□□□□ -0.33
PTN-202ENST00000393083 BBIP1A8MTZ0 92 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 MAGEB17A8MXT2 336 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 CSO75390 466 aaKnown RBP12.98□□□□□ -0.33
PTN-202ENST00000393083 UBXN7O94888 489 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 MAPK1P28482 360 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 PGM1P36871 562 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 CCR8P51685 355 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 UFM1P61960 85 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 YBX1P67809 324 aaKnown RBP12.98□□□□□ -0.33
PTN-202ENST00000393083 PHEXP78562 749 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 REEP5Q00765 189 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 ZFP36L1Q07352 338 aaKnown RBP12.98□□□□□ -0.33
PTN-202ENST00000393083 STX5Q13190 355 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 PLCL1Q15111 1095 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 MMEL1Q495T6 779 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 C10orf62Q5T681 223 aaPredicted RBP12.98□□□□□ -0.33
PTN-202ENST00000393083 CACHD1Q5VU97 1274 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 C16orf89Q6UX73 402 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 B3GNT8Q7Z7M8 397 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 AMIGO1Q86WK6 493 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 FAM129CQ86XR2 697 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 SLITRK4Q8IW52 837 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 LIX1Q8N485 282 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 APIPQ96GX9 242 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 DEPDC7Q96QD5 511 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 AIF1LQ9BQI0 150 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 EPB41L1Q9H4G0 881 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 PDP2Q9P2J9 529 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 MSRB2Q9Y3D2 182 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 ENTPD2Q9Y5L3 495 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 CROCCQ5TZA2 2017 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 MRASO14807 208 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 DUX1O43812 170 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 SLC22A3O75751 556 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 CAPN3P20807 821 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 PEBP1P30086 187 aaKnown RBP12.98□□□□□ -0.33
PTN-202ENST00000393083 KCNK10P57789 538 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 RPS13P62277 151 aaKnown RBP12.98□□□□□ -0.33
PTN-202ENST00000393083 ART3Q13508 389 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 KIAA0040Q15053 153 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 TMEM71Q6P5X7 295 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 WDR74Q6RFH5 385 aaPredicted RBP12.98□□□□□ -0.33
PTN-202ENST00000393083 TMIGD1Q6UXZ0 262 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 DEFB107AQ8IZN7 70 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 ZNF740Q8NDX6 193 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 ABHD11Q8NFV4 315 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 OR4E2Q8NGC2 313 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 OR2A1Q8NGT9 310 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 AHCYL2Q96HN2 611 aaKnown RBP12.98□□□□□ -0.33
PTN-202ENST00000393083 TEX37Q96LM6 180 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 MRPL1Q9BYD6 325 aaKnown RBP12.98□□□□□ -0.33
PTN-202ENST00000393083 SEMA6CQ9H3T2 930 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 EFCAB1Q9HAE3 211 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 NDE1Q9NXR1 346 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 OR6C2Q9NZP2 312 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 TMEM9Q9P0T7 183 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 VPS29Q9UBQ0 182 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 ANGPTL2Q9UKU9 493 aa12.98□□□□□ -0.33
PTN-202ENST00000393083 TMED5Q9Y3A6 229 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms