RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 RELTQ969Z4 430 aa15.54■□□□□ 0.08
COL2A1-202ENST00000380518 IMP4Q96G21 291 aaKnown RBP15.54■□□□□ 0.08
COL2A1-202ENST00000380518 NANOGQ9H9S0 305 aa15.54■□□□□ 0.08
COL2A1-202ENST00000380518 TMEM165Q9HC07 324 aa15.54■□□□□ 0.08
COL2A1-202ENST00000380518 BRD7Q9NPI1 651 aa15.54■□□□□ 0.08
COL2A1-202ENST00000380518 C5orf51A6NDU8 294 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 A8MUA0 341 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 PDHA2P29803 388 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 DGKEP52429 567 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 LASP1Q14847 261 aaKnown RBP15.53■□□□□ 0.08
COL2A1-202ENST00000380518 TAS1R3Q7RTX0 852 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 SEC14L4Q9UDX3 406 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 A0A0D9SEW6 157 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 SDHDO14521 159 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 GBAP04062 536 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 ALDOAP04075 364 aaKnown RBP15.53■□□□□ 0.08
COL2A1-202ENST00000380518 NR2C1P13056 603 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 PGAM2P15259 253 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 ZNF783Q6ZMS7 281 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 TREML1Q86YW5 311 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 OR8J3Q8NGG0 315 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 SETD6Q8TBK2 473 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 LRRC15Q8TF66 581 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 MKS1Q9NXB0 559 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 AFDNP55196 1824 aaKnown RBP15.53■□□□□ 0.08
COL2A1-202ENST00000380518 CCDC85CA6NKD9 419 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 ZNF670-ZNF695F2Z2N8 137 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 LSM1O15116 133 aaKnown RBP15.53■□□□□ 0.08
COL2A1-202ENST00000380518 GRID2O43424 1007 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 PCDHGA12O60330 932 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 CDRT1O95170 752 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 CHRM1P11229 460 aaPredicted RBP15.53■□□□□ 0.08
COL2A1-202ENST00000380518 PREPP48147 710 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 NFATC2Q13469 925 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 LY6G5CQ5SRR4 150 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 PRAMEF17Q5VTA0 474 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 OR4E2Q8NGC2 313 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 HCAR2Q8TDS4 363 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 SEC14L1Q92503 715 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 SLC2A13Q96QE2 648 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 TMED9Q9BVK6 235 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 RETREG1Q9H6L5 497 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 C12orf4Q9NQ89 552 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 WDR45Q9Y484 360 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 PDE4DIPQ5VU43 2346 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 J3QRK9 145 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 SOD2P04179 222 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 AGTR2P50052 363 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 SLC3A1Q07837 685 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 CD47Q08722 323 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 ADAM15Q13444 863 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 DECR1Q16698 335 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 RNF130Q86XS8 419 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 YIPF7Q8N8F6 280 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 FBXL8Q96CD0 374 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 TMEM80Q96HE8 168 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 SLC45A3Q96JT2 553 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 KCNH6Q9H252 994 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 SLC6A15Q9H2J7 730 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 REEP4Q9H6H4 257 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 SDHAF3Q9NRP4 125 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 TMEM5Q9Y2B1 443 aa15.53■□□□□ 0.08
COL2A1-202ENST00000380518 J3QLW9 94 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 INPPL1O15357 1258 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 RPP14O95059 124 aaKnown RBP15.52■□□□□ 0.08
COL2A1-202ENST00000380518 SOX14O95416 240 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 CLUP10909 449 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 ZNF19P17023 458 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 TECRLQ5HYJ1 363 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 HSDL2Q6YN16 418 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 DPAGT1Q9H3H5 408 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 PCDHGB5Q9Y5G0 923 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 PCDHGA3Q9Y5H0 932 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 MATN1P21941 496 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 F8A1P23610 371 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 TMEM115Q12893 351 aaPredicted RBP15.52■□□□□ 0.08
COL2A1-202ENST00000380518 ZNF829Q3KNS6 432 aaPredicted RBP15.52■□□□□ 0.08
COL2A1-202ENST00000380518 ABCA11PQ4W5N1 156 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 ATG9BQ674R7 924 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 OR8H3Q8N146 312 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 SHISA4Q96DD7 197 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 C11orf49Q9H6J7 331 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 CYTH4Q9UIA0 394 aa15.52■□□□□ 0.08
COL2A1-202ENST00000380518 LEFTY2O00292 366 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 DFNA5O60443 496 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 DSG2Q14126 1118 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 MPP2Q14168 576 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 TRAM2Q15035 370 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 TEAD2Q15562 447 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 CYS1Q717R9 158 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 ZNF598Q86UK7 904 aaKnown RBP15.52■□□□□ 0.07
COL2A1-202ENST00000380518 CEP97Q8IW35 865 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 CHERPQ8IWX8 916 aaKnown RBP15.52■□□□□ 0.07
COL2A1-202ENST00000380518 TUBA1CQ9BQE3 449 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 CCDC106Q9BWC9 280 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 FKBP14Q9NWM8 211 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 NLGN3Q9NZ94 848 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 PCDHGB6Q9Y5F9 930 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 C9J4A7 227 aa15.52■□□□□ 0.07
COL2A1-202ENST00000380518 CAPN5O15484 640 aaPredicted RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms