RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TEX264Q9Y6I9 313 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 TCRBV7S3A2A0A539 114 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 E7ESA3 106 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 GREM1O60565 184 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 ZBTB48P10074 688 aaPredicted RBP11.41□□□□□ -0.58
NPHP4-202ENST00000378161 MLNP12872 115 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 ADRA1BP35368 520 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 TBX4P57082 545 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 GRB7Q14451 532 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 MFSD10Q14728 455 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 FBXO48Q5FWF7 155 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 SLC35F1Q5T1Q4 408 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 XAF1Q6GPH4 301 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 SLC27A4Q6P1M0 643 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 PIGZQ86VD9 579 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 TMC8Q8IU68 726 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 CPNE4Q96A23 557 aaPredicted RBP11.41□□□□□ -0.58
NPHP4-202ENST00000378161 APOBEC3GQ9HC16 384 aaKnown RBP11.41□□□□□ -0.58
NPHP4-202ENST00000378161 ZNF358Q9NW07 568 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 PRKAB1Q9Y478 270 aa11.41□□□□□ -0.58
NPHP4-202ENST00000378161 LAMA4Q16363 1823 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 FAM86C2PA6NEL3 165 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 FFAR3O14843 346 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 GPR42O15529 346 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 SSX4O60224 188 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 IFNA10P01566 189 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 SPARCP09486 303 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 SAGP10523 405 aaPredicted RBP11.4□□□□□ -0.58
NPHP4-202ENST00000378161 ACADMP11310 421 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 HDCP19113 662 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 GABRB3P28472 473 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 CDH4P55283 916 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 KIAA1024LP59773 190 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 PSPHP78330 225 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 KCNA10Q16322 511 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 OR2B11Q5JQS5 317 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 GPR139Q6DWJ6 353 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 OR10H5Q8NGA6 315 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 OR4C6Q8NH72 309 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.4□□□□□ -0.58
NPHP4-202ENST00000378161 OR51J1Q9H342 316 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 GNG8Q9UK08 70 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 LOC390937A0A1W2PQ73 354 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 H7C1Q1 480 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 DCLK1O15075 740 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 TSPAN12O95859 305 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 ITGB6P18564 788 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 PRKACGP22612 351 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 XYLT1Q86Y38 959 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 TMEM185AQ8NFB2 350 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 BSCL2Q96G97 398 aaPredicted RBP11.4□□□□□ -0.58
NPHP4-202ENST00000378161 OR51E2Q9H255 320 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 RHBGQ9H310 441 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 BABAM2Q9NXR7 383 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 PDP1Q9P0J1 537 aaPredicted RBP11.4□□□□□ -0.58
NPHP4-202ENST00000378161 C10orf71Q711Q0 1435 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 BCLAF3A2AJT9 711 aaKnown RBP11.4□□□□□ -0.58
NPHP4-202ENST00000378161 SLC31A2O15432 143 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 EIF1BO60739 113 aaKnown RBP11.4□□□□□ -0.58
NPHP4-202ENST00000378161 PAX6P26367 422 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 NOS2P35228 1153 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 EIF1P41567 113 aaKnown RBP11.4□□□□□ -0.58
NPHP4-202ENST00000378161 NOVP48745 357 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 XKP51811 444 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 FCGRTP55899 365 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 CARD18P57730 90 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 PDZK1IP1Q13113 114 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 RNF130Q86XS8 419 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 CSPG4P5Q96PW8 444 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 PRDM12Q9H4Q4 367 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 MBD1Q9UIS9 605 aaPredicted RBP11.4□□□□□ -0.58
NPHP4-202ENST00000378161 SCP2D1Q9UJQ7 156 aa11.4□□□□□ -0.58
NPHP4-202ENST00000378161 A8MVJ9 347 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF705EA8MWA4 302 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 D6RAR5 112 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 PNPP00491 289 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 HGFP14210 728 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 PRKCHP24723 683 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 CRATP43155 626 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 RIDAP52758 137 aaKnown RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 PLK1P53350 603 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 C21orf58P58505 322 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 MAT1AQ00266 395 aaKnown RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 CACNB2Q08289 660 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 CBLBQ13191 982 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 AP5B1Q2VPB7 878 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 KRBOX4Q5JUW0 171 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 SLC30A6Q6NXT4 461 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 HACD2Q6Y1H2 254 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 TIAM2Q8IVF5 1701 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 NIPA2Q8N8Q9 360 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF300Q96RE9 604 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 OMDQ99983 421 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 ZDHHC2Q9UIJ5 367 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 SLC6A14Q9UN76 642 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 PRG3Q9Y2Y8 225 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 N4BP2Q86UW6 1770 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-202ENST00000378161 C17orf113A0A1B0GUU1 675 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 OR6C75A6NL08 312 aa11.39□□□□□ -0.59
NPHP4-202ENST00000378161 C9JVG2 144 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms