RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 GALNT13Q8IUC8 556 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 RNF128Q8TEB7 428 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 NT5C3BQ969T7 300 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ACSL6Q9UKU0 697 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 EEF1E1O43324 174 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 RAMP2O60895 175 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 FGF7P21781 194 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SUMO1P63165 101 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 TRIM61Q5EBN2 209 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 BCL2L15Q5TBC7 163 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 MTFR2Q6P444 385 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 RPL22L1Q6P5R6 122 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 SLC15A3Q8IY34 581 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 A8MV72 311 aaPredicted RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 CD247P20963 164 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 PRR5P85299 388 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 TNFRSF17Q02223 184 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SLC36A3Q495N2 470 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 TPRA1Q86W33 373 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ZNF527Q8NB42 609 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 PLPP5Q8NEB5 264 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 OR52H1Q8NGJ2 320 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 PTGES2Q9H7Z7 377 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 CXXC1Q9P0U4 656 aaPredicted RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 TMPRSS11EQ9UL52 423 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 IRS2Q9Y4H2 1338 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ACOD1A6NK06 481 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TNFRSF10BO14763 440 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TLX2O43763 284 aaPredicted RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 OR8U9P0C7N5 309 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 METTL15P1P0C7V9 234 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 BDKRB2P30411 391 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TAS2R50P59544 299 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ACTA2P62736 377 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ACTG2P63267 376 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 RAB31Q13636 194 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ZACNQ401N2 412 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PHYHIPQ92561 330 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TMEM41AQ96HV5 264 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ACAD8Q9UKU7 415 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PCDHB7Q9Y5E2 793 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 CILPO75339 1184 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 SLC25A12O75746 678 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 LATS1O95835 1130 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TUBG1P23258 451 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ITPKAP23677 461 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 EPHX2P34913 555 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PDZK1IP1Q13113 114 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 NAA40Q86UY6 237 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 UNC93AQ86WB7 457 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 SLC44A5Q8NCS7 719 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 SHC3Q92529 594 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 SPATA33Q96N06 139 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 RANGRFQ9HD47 186 aaPredicted RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 MOCS1Q9NZB8 636 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 DNAJC5BQ9UF47 199 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 FBXL21Q9UKT6 434 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 BCS1LQ9Y276 419 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 GAPVD1Q14C86 1478 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 LOC285095A0A1B0GVY8 99 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 RNH1P13489 461 aaKnown RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 HSD17B2P37059 387 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 FABP6P51161 128 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 USP41Q3LFD5 358 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 CLDN22Q8N7P3 220 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 HERVK_113Q902F9 699 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 KCNC2Q96PR1 638 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 GPER1Q99527 375 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 CACNG2Q9Y698 323 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ARHGEF12Q9NZN5 1544 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TREHO43280 583 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 STK16O75716 305 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 RHCEP18577 417 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 RAB5AP20339 215 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 SREBF1P36956 1147 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PLK1P53350 603 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 CMASQ8NFW8 434 aaPredicted RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 OR10Z1Q8NGY1 313 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TWIST2Q8WVJ9 160 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TGIF2Q9GZN2 237 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 GAR1Q9NY12 217 aaKnown RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 CHRNA9Q9UGM1 479 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TCAF1Q9Y4C2 921 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 EDC4Q6P2E9 1401 aaKnown RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 RGS8P57771 180 aaPredicted RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 CAPSQ13938 189 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 AGMOQ6ZNB7 445 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 LSMEM2Q8N112 164 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PIGBQ92521 554 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PCBD2Q9H0N5 130 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 KCNQ5Q9NR82 932 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 DZANK1Q9NVP4 752 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 POU2F3Q9UKI9 436 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 NDUFS8O00217 210 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TAF6P49848 677 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PPIGQ13427 754 aaKnown RBP eCLIP6.42□□□□□ -1.381e-7■■■□□ 14.9
UBR4-204ENST00000375254 C1orf52Q8N6N3 182 aaKnown RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 BEND7Q8N7W2 519 aaPredicted RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 OR10K1Q8NGX5 313 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PYCR2Q96C36 320 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms