RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 FOXR2Q6PJQ5 311 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 COQ8AQ8NI60 647 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 CCM2Q9BSQ5 444 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 PRELID1Q9Y255 219 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 RUVBL1Q9Y265 456 aaKnown RBP13.89□□□□□ -0.19
TRAF1-201ENST00000373887 KCNIP3Q9Y2W7 256 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 UPK3BL1B0FP48 263 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 UPK3BL2E5RIL1 263 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 B4GALT2O60909 372 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 MSX1P28360 303 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 MPIP34949 423 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 CCNFP41002 786 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 ADAM15Q13444 863 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 LRRC37A5PQ49AS3 106 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 PAQR3Q6TCH7 311 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 LGI4Q8N135 537 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 GMLQ99445 158 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 HERC2P3Q9BVR0 1158 aa13.89□□□□□ -0.19
TRAF1-201ENST00000373887 A0A1W2PP55 124 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 GRXCR1A8MXD5 290 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 ENTPD6O75354 484 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 POP7O75817 140 aaKnown RBP13.88□□□□□ -0.19
TRAF1-201ENST00000373887 ATP1B2P14415 290 aaPredicted RBP13.88□□□□□ -0.19
TRAF1-201ENST00000373887 CCR8P51685 355 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 AIMP2Q13155 320 aaKnown RBP13.88□□□□□ -0.19
TRAF1-201ENST00000373887 CDCA2Q69YH5 1023 aaPredicted RBP13.88□□□□□ -0.19
TRAF1-201ENST00000373887 SCGB3A2Q96PL1 93 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 GPR174Q9BXC1 333 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 PRORSD1PA6NEY8 169 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 CASRP41180 1078 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 MAGEA11P43364 429 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 PSMA6P60900 246 aaKnown RBP13.88□□□□□ -0.19
TRAF1-201ENST00000373887 C1orf61Q13536 156 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 HERC3Q15034 1050 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 ARHGAP40Q5TG30 622 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 GKN2Q86XP6 184 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 SORCS1Q8WY21 1168 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 NDC1Q9BTX1 674 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 STRA6Q9BX79 667 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 RBCK1Q9BYM8 510 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 ATP6V1G1O75348 118 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 CDRT1O95170 752 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 CA3P07451 260 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 STOMP27105 288 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 TAS2R39P59534 338 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 ABHD13Q7L211 337 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 NKD2Q969F2 451 aaPredicted RBP13.88□□□□□ -0.19
TRAF1-201ENST00000373887 GATA5Q9BWX5 397 aaPredicted RBP13.88□□□□□ -0.19
TRAF1-201ENST00000373887 TPSD1Q9BZJ3 242 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 ZDHHC3Q9NYG2 299 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 POMPQ9Y244 141 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 NOTOA8MTQ0 251 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 CDC7O00311 574 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 JMJD7P0C870 316 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 KCNE1P15382 129 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 ENGP17813 658 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 FXYD6P3P58550 94 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 PPP1R8Q12972 351 aaKnown RBP13.88□□□□□ -0.19
TRAF1-201ENST00000373887 BNIP3Q12983 259 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 DSC3Q14574 896 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 HSDL2Q6YN16 418 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 ZNF517Q6ZMY9 492 aaPredicted RBP13.88□□□□□ -0.19
TRAF1-201ENST00000373887 PHTF2Q8N3S3 785 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 ZNF527Q8NB42 609 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 PHC3Q8NDX5 983 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 DUOX1Q9NRD9 1551 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 PADI2Q9Y2J8 665 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 TRAV6A0A075B6T7 132 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 A0A1B0GVC2 190 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 TNFRSF10BO14763 440 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 ERI3O43414 337 aaKnown RBP13.88□□□□□ -0.19
TRAF1-201ENST00000373887 H6PDO95479 791 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 MERTKQ12866 999 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 WDR45BQ5MNZ6 344 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 KLHDC10Q6PID8 442 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 PCBD2Q9H0N5 130 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 FZD3Q9NPG1 666 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 KLRF1Q9NZS2 232 aa13.88□□□□□ -0.19
TRAF1-201ENST00000373887 MUSKO15146 869 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 GNAZP19086 355 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 VIPR2P41587 438 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 ARRB1P49407 418 aaPredicted RBP13.87□□□□□ -0.19
TRAF1-201ENST00000373887 MLLT10P55197 1068 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 CDH15P55291 814 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 DSTNP60981 165 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 VMACQ2NL98 169 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PLEKHG6Q3KR16 790 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 MND1Q9BWT6 205 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PTTG2Q9NZH5 202 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 WASF3Q9UPY6 502 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 KNDC1Q76NI1 1749 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 UNCXA6NJT0 531 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 ZNF670-ZNF695F2Z2N8 137 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 GBAP04062 536 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 MLLT6P55198 1093 aaPredicted RBP13.87□□□□□ -0.19
TRAF1-201ENST00000373887 PON2Q15165 354 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 TPRG1LQ5T0D9 272 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 SUSD1Q6UWL2 747 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 TMEM126BQ8IUX1 230 aa13.87□□□□□ -0.19
TRAF1-201ENST00000373887 CLDN19Q8N6F1 224 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms