RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 MAGEA3P43357 314 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 ACTBP60709 375 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 ACTG1P63261 375 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 GPR68Q15743 365 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 TBC1D15Q8TC07 691 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 TMEM234Q8WY98 164 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 TMEM203Q969S6 136 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 GATA5Q9BWX5 397 aaPredicted RBP12.08□□□□□ -0.48
TPR-201ENST00000367478 PAK1IP1Q9NWT1 392 aaPredicted RBP12.08□□□□□ -0.48
TPR-201ENST00000367478 PIAS1O75925 651 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 NCS1P62166 190 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 CNTN2Q02246 1040 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 NBPF12Q5TAG4 269 aaPredicted RBP12.08□□□□□ -0.48
TPR-201ENST00000367478 XYLT1Q86Y38 959 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 TTYH2Q9BSA4 534 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 FNIP2Q9P278 1114 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 RP1P56715 2156 aa12.08□□□□□ -0.48
TPR-201ENST00000367478 INMT-MINDY4F8WBC2 141 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 CTHP32929 405 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 SH3D19Q5HYK7 790 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 KANK2Q63ZY3 851 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 FRG2Q64ET8 278 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 ZNF767PQ75MW2 155 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 FRG2BQ96QU4 278 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 CCDC32Q9BV29 185 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 VNN3Q9NY84 501 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 ADAM18Q9Y3Q7 739 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 MRPL42Q9Y6G3 142 aaKnown RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 CAPN5O15484 640 aaPredicted RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 OR2B3O76000 313 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 FRKP42685 505 aaPredicted RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 FXYD6P3P58550 94 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 KCTD13Q8WZ19 329 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 ALG3Q92685 438 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 RP1L1Q8IWN7 2480 aaPredicted RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 STBD1O95210 358 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 ENGP17813 658 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 RIN1Q13671 783 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 EML3Q32P44 896 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 WFIKKN2Q8TEU8 576 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 TLCD1Q96CP7 247 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 LDAHQ9H6V9 325 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 CNTN3Q9P232 1028 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 HCN4Q9Y3Q4 1203 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 MLLT3P42568 568 aaPredicted RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 PPP5CP53041 499 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 PLGLB1Q02325 96 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 KCNC4Q03721 635 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 RPP30P78346 268 aaKnown RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 CEACAM20Q6UY09 585 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 ANKS1BQ7Z6G8 1248 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 PXKQ7Z7A4 578 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 GRHL3Q8TE85 626 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 CGREF1Q99674 301 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 TRAV6A0A075B6T7 132 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 DFNA5O60443 496 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 TRAM2Q15035 370 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 ARL6IP1Q15041 203 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 CARM1Q86X55 608 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 C2orf73Q8N5S3 287 aaPredicted RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 PNO1Q9NRX1 252 aaKnown RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 DUS2Q9NX74 493 aaKnown RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 FBXL3Q9UKT7 428 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 ZNF169Q14929 603 aaPredicted RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 CLCA4Q14CN2 919 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 LNX2Q8N448 690 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 NEIL3Q8TAT5 605 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 AUTS2Q8WXX7 1259 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 HYLS1Q96M11 299 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 SYT3Q9BQG1 590 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 EME2A4GXA9 379 aaPredicted RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 IQCF5A8MTL0 148 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 NT5C1B-RDH14C9J2C7 533 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 PEX12O00623 359 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 CLRN1P58418 232 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 ZNF630Q2M218 657 aaPredicted RBP12.07□□□□□ -0.48
TPR-201ENST00000367478 GSG1LQ6UXU4 331 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 GNPDA2Q8TDQ7 276 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 DNAJC19Q96DA6 116 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 SSX3Q99909 188 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 ADAP2Q9NPF8 381 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 TAS2R9Q9NYW1 312 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 LRFN1Q9P244 771 aa12.07□□□□□ -0.48
TPR-201ENST00000367478 A0A1W2PP18 115 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 FAM155BO75949 473 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 DNASE1P24855 282 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 PITRM1Q5JRX3 1037 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 WDR53Q7Z5U6 358 aaPredicted RBP12.06□□□□□ -0.48
TPR-201ENST00000367478 ARL11Q969Q4 196 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 TMBIM1Q969X1 311 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ZNF578Q96N58 590 aaPredicted RBP12.06□□□□□ -0.48
TPR-201ENST00000367478 OR4K3Q96R72 315 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 OR52B2Q96RD2 323 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 CPXM1Q96SM3 734 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 OXSMQ9NWU1 459 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 TMEM150BA6NC51 233 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 SULT1C2O00338 296 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 AHSA1O95433 338 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms