RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ULK1O75385 1050 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 RASGRP1O95267 797 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 EML2O95834 649 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 TNFP01375 233 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 ANXA6P08133 673 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 THEGLP0DJG4 465 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 DCKP27707 260 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 HLCSP50747 726 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 ADARB1P78563 741 aaKnown RBP12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 IRF8Q02556 426 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 RPL6Q02878 288 aaKnown RBP12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 CHRNB3Q05901 458 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 PWP1Q13610 501 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 ARHGAP19Q14CB8 494 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 CLCA4Q14CN2 919 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 UAP1L1Q3KQV9 507 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 GGTA1PQ4G0N0 100 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 SLC2A7Q6PXP3 512 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 SLC36A4Q6YBV0 504 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 Q6ZSR9 355 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 SDCCAG3Q96C92 435 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 THAP11Q96EK4 314 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 KLHDC7BQ96G42 594 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 ZBTB18Q99592 522 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 UGT2B28Q9BY64 529 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 TMEM168Q9H0V1 697 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 TCEAL2Q9H3H9 227 aaPredicted RBP12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 POLR1BQ9H9Y6 1135 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 CCDC177Q9NQR7 707 aaPredicted RBP12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 PRDM8Q9NQV8 689 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 GPR27Q9NS67 375 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 IMP3Q9NV31 184 aaKnown RBP12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 TMEM9Q9P0T7 183 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 PLAGL1Q9UM63 463 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 SNX6Q9UNH7 406 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 DYRK1BQ9Y463 629 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 HEATR5BQ9P2D3 2071 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 TTC28Q96AY4 2481 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 PRAMEF33A0A0G2JMD5 474 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 FFAR3O14843 346 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 GPR42O15529 346 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 PRAMEF4O60810 478 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 WNT1P04628 370 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 RAP2AP10114 183 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 HRH2P25021 359 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 CD27P26842 260 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 IL12AP29459 219 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 TBPL1P62380 186 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 CHIT1Q13231 466 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 CPSF6Q16630 551 aaKnown RBP eCLIP12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 ZNF542PQ5EBM4 170 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 XKR6Q5GH73 641 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 PRAMEF9Q5VWM5 478 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 LIPJQ5W064 366 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 KCTD8Q6ZWB6 473 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 DCP2Q8IU60 420 aaKnown RBP12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 RIMKLAQ8IXN7 391 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 OR8J3Q8NGG0 315 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 PPP3R2Q96LZ3 170 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 INSM2Q96T92 566 aaPredicted RBP12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 CGREF1Q99674 301 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 DOK1Q99704 481 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 MVB12BQ9H7P6 319 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 TRNAU1APQ9NX07 287 aaKnown RBP12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 GPRC5BQ9NZH0 403 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 SLAMF8Q9P0V8 285 aa12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 SCHIP1Q9P0W5 487 aaPredicted RBP12.65□□□□□ -0.38
SQSTM1-201ENST00000360718 SNAP29O95721 258 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 VARSP26640 1264 aaKnown RBP12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 ALDH3A2P51648 485 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 OR4D2P58180 307 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 CTBSQ01459 385 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 ILF3Q12906 894 aaKnown RBP eCLIP12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 EPS8Q12929 822 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 EIF2B5Q13144 721 aaKnown RBP12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 MAD2L1Q13257 205 aaPredicted RBP12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 PMS2P3Q13401 168 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 TMED1Q13445 227 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 NR6A1Q15406 480 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 CYP20A1Q6UW02 462 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 OFCC1Q8IZS5 231 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 SFRP1Q8N474 314 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 L3MBTL4Q8NA19 623 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 EDAQ92838 391 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 NRBF2Q96F24 287 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 RDH12Q96NR8 316 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 IL17FQ96PD4 163 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 OR4K3Q96R72 315 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 ELOVL6Q9H5J4 265 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 SPATA7Q9P0W8 599 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 TBC1D29Q9UFV1 150 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 AP3M1Q9Y2T2 418 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 DGKBQ9Y6T7 804 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 COLEC10Q9Y6Z7 277 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 OR52A4PA6NMU1 304 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 SLC28A1O00337 649 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 RGS14O43566 566 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 KCNH1O95259 989 aa12.64□□□□□ -0.39
SQSTM1-201ENST00000360718 CLIC3O95833 236 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms