RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SNAPC1Q16533 368 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 FNDC3BQ53EP0 1204 aaKnown RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 C10orf62Q5T681 223 aaPredicted RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 IRAK1BP1Q5VVH5 260 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 KLHL17Q6TDP4 642 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 CCBE1Q6UXH8 406 aaPredicted RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 TUBA1AQ71U36 451 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 RAB43Q86YS6 212 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 KRT78Q8N1N4 520 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 PAPD5Q8NDF8 572 aaKnown RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 WFDC5Q8TCV5 224 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 CD99L2Q8TCZ2 262 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 SORCS1Q8WY21 1168 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 WBP2Q969T9 261 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 CEP295NLQ96MC4 621 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 YIPF4Q9BSR8 244 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 ACTL8Q9H568 366 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 KLHL1Q9NR64 748 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 CFL2Q9Y281 166 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 MED16Q9Y2X0 877 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 PRKAB1Q9Y478 270 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 PCDHB11Q9Y5F2 797 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 PMF1-BGLAPU3KQ54 211 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 MYO7AQ13402 2215 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 CA12O43570 354 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 NME6O75414 186 aaPredicted RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 TNFRSF21O75509 655 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 JUPP14923 745 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 CD40LGP29965 261 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 RYKP34925 604 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 CD300CQ08708 224 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 MGAT3Q09327 533 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 PROX2Q3B8N5 592 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 GDPD4Q6W3E5 623 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 CCDC115Q96NT0 180 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 NTMT1Q9BV86 223 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 POLR2J3Q9H1A7 115 aaKnown RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 TRIM45Q9H8W5 580 aaPredicted RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 PLAGL1Q9UM63 463 aa6.59□□□□□ -1.35
RTN4-203ENST00000357376 TRIP12Q14669 1992 aaPredicted RBP6.59□□□□□ -1.35
RTN4-203ENST00000357376 A0A1W2PQ45 241 aaPredicted RBP6.59□□□□□ -1.36
RTN4-203ENST00000357376 A0A1W2PQY0 241 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 QSOX1O00391 747 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 CASKO14936 926 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 SCAMP1O15126 338 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 KIAA0513O60268 411 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 SLC16A8O95907 504 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 CSF2P04141 144 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 AMD1P17707 334 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 PTNP21246 168 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 RPL3P39023 403 aaKnown RBP6.59□□□□□ -1.36
RTN4-203ENST00000357376 ARHGEF6Q15052 776 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 CXorf57Q6NSI4 855 aaKnown RBP6.59□□□□□ -1.36
RTN4-203ENST00000357376 C8orf82Q6P1X6 216 aaPredicted RBP6.59□□□□□ -1.36
RTN4-203ENST00000357376 CD300LGQ6UXG3 332 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 CEACAM20Q6UY09 585 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 ZSWIM9Q86XI8 627 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 OR6Q1Q8NGQ2 317 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 HUS1BQ8NHY5 278 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 GEMIN6Q8WXD5 167 aaKnown RBP6.59□□□□□ -1.36
RTN4-203ENST00000357376 MGLLQ99685 303 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 BEX2Q9BXY8 128 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 MTG2Q9H4K7 406 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 EHD1Q9H4M9 534 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 CCDC177Q9NQR7 707 aaPredicted RBP6.59□□□□□ -1.36
RTN4-203ENST00000357376 TAS2R16Q9NYV7 291 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 GSTK1Q9Y2Q3 226 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 PCNTO95613 3336 aa6.59□□□□□ -1.36
RTN4-203ENST00000357376 SOCS5O75159 536 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 PRR35P0CG20 571 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 GSTT2P0CG29 244 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 GSTT2BP0CG30 244 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 JUNBP17275 347 aaPredicted RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 IL12RB1P42701 662 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CLK3P49761 638 aaKnown RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 QPRTQ15274 297 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 SOWAHCQ53LP3 525 aaPredicted RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 ZDHHC20Q5W0Z9 365 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 XAF1Q6GPH4 301 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 MACC1Q6ZN28 852 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CCDC80Q76M96 950 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CHST14Q8NCH0 376 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 TIFAQ96CG3 184 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 TRNT1Q96Q11 434 aaKnown RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 GFM1Q96RP9 751 aaKnown RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 ZNF607Q96SK3 696 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CSF3RQ99062 836 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CCM2Q9BSQ5 444 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 VNN3Q9NY84 501 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 COMMD3Q9UBI1 195 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 INSL5Q9Y5Q6 135 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 SPIN1Q9Y657 262 aaPredicted RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 PIPSLA2A3N6 862 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 HTR3EA5X5Y0 456 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 TLR4O00206 839 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 PSIP1O75475 530 aaKnown RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 SERPINB7O75635 380 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 RFPL2O75678 378 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 SERPINI2O75830 405 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms