RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 AFTPHQ6ULP2 937 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PARM1Q6UWI2 310 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 DLEU7Q6UYE1 221 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ANO5Q75V66 913 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TAF8Q7Z7C8 310 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PIP4P1Q86T03 277 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 IRGQQ8WZA9 623 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 LINGO1Q96FE5 620 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 KCNK16Q96T55 309 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TXN2Q99757 166 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PSD2Q9BQI7 771 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 NYXQ9GZU5 481 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CXXC4Q9H2H0 198 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PLAC1Q9HBJ0 212 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SEMA4GQ9NTN9 838 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 OR6C2Q9NZP2 312 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SLC17A6Q9P2U8 582 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 MAD2L2Q9UI95 211 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 FOXA2Q9Y261 457 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ATP10BO94823 1461 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 BRCA1P38398 1863 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ABCC4O15439 1325 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GPR89AB7ZAQ6 455 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF587BE7ETH6 402 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GRID2O43424 1007 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 B4GAT1O43505 415 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TLX2O43763 284 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GPRIN2O60269 458 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GPR137BO60478 399 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 BCAR3O75815 825 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CYP1A2P05177 515 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PGK2P07205 417 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GPR89BP0CG08 455 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 IL4RP24394 825 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PKLRP30613 574 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GDI1P31150 447 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TMPOP42166 694 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TNFSF10P50591 281 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CCL11P51671 97 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GBX2P52951 348 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CDH11P55287 796 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 RPS13P62277 151 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 HERV-K104P63124 156 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CX3CL1P78423 397 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 HSF1Q00613 529 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ID2Q02363 134 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GABPB1Q06547 395 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GPR33Q49SQ1 333 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM52BQ4KMG9 183 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CEP55Q53EZ4 464 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ZC2HC1CQ53FD0 456 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 DCAF10Q5QP82 559 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CYP4A22Q5TCH4 519 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 RBM43Q6ZSC3 357 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PATL1Q86TB9 770 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SYVN1Q86TM6 617 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 THEM5Q8N1Q8 247 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 FAM133AQ8N9E0 248 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 OR56B1Q8NGI3 324 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 FBXO30Q8TB52 745 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SLC5A11Q8WWX8 675 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SMG7Q92540 1137 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PIGTQ969N2 578 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 LGALS12Q96DT0 336 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ALKBH7Q9BT30 221 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 DUSP26Q9BV47 211 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF747Q9BV97 191 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 IDI2Q9BXS1 227 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 WWTR1Q9GZV5 400 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 COMMD8Q9NX08 183 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 KCNN3Q9UGI6 736 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 RALYQ9UKM9 306 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CCPG1Q9ULG6 757 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ENTPD4Q9Y227 616 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 YIPF1Q9Y548 306 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 MUC2Q02817 5179 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GOLGB1Q14789 3259 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 RP1L1Q8IWN7 2480 aaPredicted RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ZMYM2Q9UBW7 1377 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 DNMT1P26358 1616 aaKnown RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 PLXNA3P51805 1871 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CCDC162PA2VCL2 907 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 MTMR11A4FU01 709 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 C4orf47A7E2U8 309 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 UBXN8O00124 270 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SLC28A1O00337 649 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 WNT9BO14905 357 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CHUKO15111 745 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SLC28A2O43868 658 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 RPS6KA5O75582 802 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CA3P07451 260 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 IQCF3P0C7M6 154 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 NAGAP17050 411 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 MAKP20794 623 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SOX6P35712 828 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 PRPHP41219 470 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SLC6A12P48065 614 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SLC9A3P48764 834 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SEC61BP60468 96 aaKnown RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 PRKCZQ05513 592 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms