RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 DDX6P26196 483 aaKnown RBP eCLIP10.02□□□□□ -0.812e-8■■■■■ 34.9
SMPD4-201ENST00000351288 GJA4P35212 333 aa10.02□□□□□ -0.81
SMPD4-201ENST00000351288 MNX1P50219 401 aaPredicted RBP10.02□□□□□ -0.81
SMPD4-201ENST00000351288 MAPK12P53778 367 aa10.02□□□□□ -0.81
SMPD4-201ENST00000351288 HNRNPA1L2Q32P51 320 aaKnown RBP10.02□□□□□ -0.81
SMPD4-201ENST00000351288 PRAMEF13Q5VWM6 474 aa10.02□□□□□ -0.81
SMPD4-201ENST00000351288 ZDHHC20Q5W0Z9 365 aa10.02□□□□□ -0.81
SMPD4-201ENST00000351288 C16orf87Q6PH81 154 aa10.02□□□□□ -0.81
SMPD4-201ENST00000351288 GALNT13Q8IUC8 556 aa10.02□□□□□ -0.81
SMPD4-201ENST00000351288 DPP10Q8N608 796 aa10.02□□□□□ -0.81
SMPD4-201ENST00000351288 SAMD11Q96NU1 681 aa10.02□□□□□ -0.81
SMPD4-201ENST00000351288 TRIM39Q9HCM9 518 aa10.02□□□□□ -0.81
SMPD4-201ENST00000351288 CNOT1A5YKK6 2376 aaKnown RBP10.01□□□□□ -0.81
SMPD4-201ENST00000351288 QSOX1O00391 747 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 DCTP40126 519 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 AP1S2P56377 157 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 C1orf61Q13536 156 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 RRM2BQ7LG56 351 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 THAP5Q7Z6K1 395 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 ZDHHC21Q8IVQ6 265 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 MICU2Q8IYU8 434 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 CRIPAKQ8N1N5 446 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 TRAM1L1Q8N609 369 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 GIPC3Q8TF64 312 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 ASB11Q8WXH4 323 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 TANKQ92844 425 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 ARMC5Q96C12 935 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 MBOAT4Q96T53 435 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 SLC12A9Q9BXP2 914 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 DPEP2Q9H4A9 486 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 KAT8Q9H7Z6 458 aaKnown RBP10.01□□□□□ -0.81
SMPD4-201ENST00000351288 REEP1Q9H902 201 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 PAK1IP1Q9NWT1 392 aaPredicted RBP10.01□□□□□ -0.81
SMPD4-201ENST00000351288 PLEKHM1Q9Y4G2 1056 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 ETHE1O95571 254 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 C6orf47O95873 294 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 HNRNPA1P09651 372 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMPD4-201ENST00000351288 PSMB9P28065 219 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 ZNF77Q15935 545 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 CDKN3Q16667 212 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMPD4-201ENST00000351288 PARM1Q6UWI2 310 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 PRR23CQ6ZRP0 262 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 PARGQ86W56 976 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 KRT78Q8N1N4 520 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 PSD4Q8NDX1 1056 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 OR7G3Q8NG95 312 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 C17orf62Q9BQA9 187 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 CACYBPQ9HB71 228 aaKnown RBP10.01□□□□□ -0.81
SMPD4-201ENST00000351288 PDP1Q9P0J1 537 aaPredicted RBP10.01□□□□□ -0.81
SMPD4-201ENST00000351288 NCKAP1Q9Y2A7 1128 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 RWDD3Q9Y3V2 267 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 SCN2AQ99250 2005 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 ZNF860A6NHJ4 632 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 CACNB4O00305 520 aaPredicted RBP10.01□□□□□ -0.81
SMPD4-201ENST00000351288 UMPSP11172 480 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 CD22P20273 847 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 FUT4P22083 530 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 TUBA4AP68366 448 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 ALDH6A1Q02252 535 aaKnown RBP10.01□□□□□ -0.81
SMPD4-201ENST00000351288 COQ5Q5HYK3 327 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 PERM1Q5SV97 790 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 TMIGD1Q6UXZ0 262 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 LRRTM4Q86VH4 590 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 CYP4Z1Q86W10 505 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 TCAIMQ8N3R3 496 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 PACRGLQ8N7B6 248 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 WFIKKN2Q8TEU8 576 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 ZNF480Q8WV37 535 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 TSACCQ96A04 125 aaPredicted RBP10.01□□□□□ -0.81
SMPD4-201ENST00000351288 CLMPQ9H6B4 373 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 TPT1P8Q9HAU6 139 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 SERHLQ9NQF3 203 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 IMPAD1Q9NX62 359 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 FZD4Q9ULV1 537 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 CFAP54Q96N23 3096 aa10.01□□□□□ -0.81
SMPD4-201ENST00000351288 SCN8AQ9UQD0 1980 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 DOCK9Q9BZ29 2069 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 KLF8O95600 359 aaPredicted RBP10□□□□□ -0.81
SMPD4-201ENST00000351288 HTR1AP08908 422 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 AK4P27144 223 aaPredicted RBP10□□□□□ -0.81
SMPD4-201ENST00000351288 MASP1P48740 699 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 HNMTP50135 292 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 VLDLRP98155 873 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 ID2Q02363 134 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 ILF2Q12905 390 aaKnown RBP10□□□□□ -0.81
SMPD4-201ENST00000351288 ITGADQ13349 1161 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 CST6Q15828 149 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 RUNDC3AQ59EK9 446 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 MFSD4BQ5TF39 518 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 MTSS1LQ765P7 747 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 LRRC70Q7Z2Q7 622 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 ADHFE1Q8IWW8 467 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 NRBF2Q96F24 287 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 RUVBL1Q9Y265 456 aaKnown RBP10□□□□□ -0.81
SMPD4-201ENST00000351288 TRANK1O15050 2925 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 PRAMEF33A0A0G2JMD5 474 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 LOC100130705A0A1B0GUX0 176 aa10□□□□□ -0.81
SMPD4-201ENST00000351288 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10□□□□□ -0.81
SMPD4-201ENST00000351288 H3BN98 237 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms