RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PCBD2Q9H0N5 130 aa17.52■□□□□ 0.39
SMC4-201ENST00000344722 THG1LQ9NWX6 298 aaKnown RBP17.52■□□□□ 0.39
SMC4-201ENST00000344722 SLC27A6Q9Y2P4 619 aa17.52■□□□□ 0.39
SMC4-201ENST00000344722 PIK3C2AO00443 1686 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 SH3D21A4FU49 640 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 SEC23BQ15437 767 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 SOCS4Q8WXH5 440 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 NSUN5Q96P11 429 aaKnown RBP17.51■□□□□ 0.39
SMC4-201ENST00000344722 GON7Q9BXV9 100 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 SAV1Q9H4B6 383 aaPredicted RBP17.51■□□□□ 0.39
SMC4-201ENST00000344722 BEX1Q9HBH7 125 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 GPSM3Q9Y4H4 160 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 M0R036 132 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 NXPE1Q8N323 547 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 FAM110BQ8TC76 370 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 UQCRC1P31930 480 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 AVPR1BP47901 424 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 USF2Q15853 346 aaPredicted RBP17.51■□□□□ 0.39
SMC4-201ENST00000344722 AGAP7PQ5VUJ5 663 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 C22orf42Q6IC83 251 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 ATP6V1C2Q8NEY4 427 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 ZMIZ2Q8NF64 920 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 OR7G1Q8NGA0 311 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 TBC1D15Q8TC07 691 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 TRIM43Q96BQ3 446 aaPredicted RBP17.51■□□□□ 0.39
SMC4-201ENST00000344722 NXPE2Q96DL1 559 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 CDCA5Q96FF9 252 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 NDOR1Q9UHB4 597 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 STK25O00506 426 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 PPEF2O14830 753 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 CELF2O95319 508 aaKnown RBP17.51■□□□□ 0.39
SMC4-201ENST00000344722 MT-ND5P03915 603 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 KDELR2P33947 212 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 AGTR2P50052 363 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 DGKEP52429 567 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 PROX2Q3B8N5 592 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 DUSP28Q4G0W2 176 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 ZCCHC12Q6PEW1 402 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 ZNF627Q7L945 461 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 C2orf73Q8N5S3 287 aaPredicted RBP17.51■□□□□ 0.39
SMC4-201ENST00000344722 PSD4Q8NDX1 1056 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 OR5J2Q8NH18 312 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 SNIP1Q8TAD8 396 aaKnown RBP17.51■□□□□ 0.39
SMC4-201ENST00000344722 PLD4Q96BZ4 506 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 PYCR2Q96C36 320 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 NELL2Q99435 816 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 AIFM2Q9BRQ8 373 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 ZNF350Q9GZX5 532 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 ABCG5Q9H222 651 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 ZDHHC3Q9NYG2 299 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 DNAJC15Q9Y5T4 150 aa17.51■□□□□ 0.39
SMC4-201ENST00000344722 PI15O43692 258 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 SCN2BO60939 215 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 GATBO75879 557 aaKnown RBP17.5■□□□□ 0.39
SMC4-201ENST00000344722 CPOXP36551 454 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 KCNJ9Q92806 393 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 PIP5K1AQ99755 562 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 TMEM45AQ9NWC5 275 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 COPZ2Q9P299 210 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 KCTD3Q9Y597 815 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 PRMT3O60678 531 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 RCBTB2O95199 551 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 NFE2L1Q14494 772 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 KXD1Q9BQD3 176 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 NLE1Q9NVX2 485 aaPredicted RBP17.5■□□□□ 0.39
SMC4-201ENST00000344722 CD84Q9UIB8 345 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 PCDH17O14917 1159 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 OR1F1O43749 312 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 HTR2AP28223 471 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 CA5AP35218 305 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 ST3GAL3Q11203 375 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 SLC10A2Q12908 348 aaPredicted RBP17.5■□□□□ 0.39
SMC4-201ENST00000344722 DUSP4Q13115 394 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 EXOC3L2Q2M3D2 409 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 HFE2Q6ZVN8 426 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 GALNTL5Q7Z4T8 443 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 PDZD9Q8IXQ8 264 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 METTL25Q8N6Q8 603 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 ATAD1Q8NBU5 361 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 MCCC1Q96RQ3 725 aaPredicted RBP17.5■□□□□ 0.39
SMC4-201ENST00000344722 ZCCHC3Q9NUD5 404 aaKnown RBP17.5■□□□□ 0.39
SMC4-201ENST00000344722 DUXAA6NLW8 204 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 J3QLW9 94 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 ZNF19P17023 458 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 RAB5BP61020 215 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 NTRK2Q16620 822 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 C1orf189Q5VU69 101 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 CEACAM20Q6UY09 585 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 SAMD14Q8IZD0 417 aaPredicted RBP17.5■□□□□ 0.39
SMC4-201ENST00000344722 ADGRG5Q8IZF4 528 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 CYP2S1Q96SQ9 504 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 NLKQ9UBE8 527 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 NUFIP1Q9UHK0 495 aaKnown RBP17.5■□□□□ 0.39
SMC4-201ENST00000344722 CYTH4Q9UIA0 394 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 MRTO4Q9UKD2 239 aaKnown RBP17.5■□□□□ 0.39
SMC4-201ENST00000344722 NENFQ9UMX5 172 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
SMC4-201ENST00000344722 J3KR12 359 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 FLRT2O43155 660 aa17.49■□□□□ 0.39
SMC4-201ENST00000344722 RB1P06400 928 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms