RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 OTOL1A6NHN0 477 aaPredicted RBP14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 PFDN1O60925 122 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 SRPRAP08240 638 aaKnown RBP14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 ITGAMP11215 1152 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 RANBP1P43487 201 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 GABARAPL2P60520 117 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 HBA1P69905 142 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 KDM4DQ6B0I6 523 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 FAM81AQ8TBF8 368 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 SPPL2AQ8TCT8 520 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 MIPOL1Q8TD10 442 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 ZFP90Q8TF47 636 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 STARD8Q92502 1023 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 RHBDL2Q9NX52 303 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 SPASTQ9UBP0 616 aa14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 PCYT1BQ9Y5K3 369 aaPredicted RBP14.32□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF197O14709 1029 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 SUV39H1O43463 412 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 POP7O75817 140 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 BCL10O95999 233 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 PRNPP04156 253 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 SEMG1P04279 462 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF8P17098 575 aaPredicted RBP14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 HTR1BP28222 390 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 TOP3AQ13472 1001 aaPredicted RBP14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 ANXA8L1Q5VT79 327 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF547Q8IVP9 402 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 NRSN1Q8IZ57 195 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 MMP21Q8N119 569 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 RAB2BQ8WUD1 216 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 MAGED4Q96JG8 741 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 SORBS1Q9BX66 1292 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 TRIT1Q9H3H1 467 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 BTNL2Q9UIR0 455 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 TESMINQ9Y4I5 508 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 LILRB5O75023 590 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 UGT2B11O75310 529 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 RYKP34925 604 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 GP2P55259 537 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF763Q0D2J5 394 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 NLRP8Q86W28 1048 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 OR9A1PQ8NGU1 263 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 BADQ92934 168 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 MUL1Q969V5 352 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 RAD9AQ99638 391 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 GABARAPL1Q9H0R8 117 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 TRIM39Q9HCM9 518 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 DMRT3Q9NQL9 472 aa14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 TDRKHQ9Y2W6 561 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 CFAP20Q9Y6A4 193 aaKnown RBP14.31□□□□□ -0.12
VIPAS39-202ENST00000343765 ADH1CP00326 375 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 KLK1P06870 262 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 PCSK2P16519 638 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 HOXA9P31269 272 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 RRM2P31350 389 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 OR1E2P47887 323 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 HNRNPFP52597 415 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 TAS2R50P59544 299 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 TAP2Q03519 686 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 C2orf80Q0P641 193 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 TUBA3CQ13748 450 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 CAMK1Q14012 370 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 SPCS2Q15005 226 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 ZC3H12BQ5HYM0 836 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 TMC5Q6UXY8 1006 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 FAM83HQ6ZRV2 1179 aaPredicted RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 CELF5Q8N6W0 485 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 SETD9Q8NE22 299 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 POP5Q969H6 163 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 SLC35A5Q9BS91 424 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 ZCCHC2Q9C0B9 1178 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 CHST8Q9H2A9 424 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 REEP4Q9H6H4 257 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 ADPRHL2Q9NX46 363 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 MAP4K5Q9Y4K4 846 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 MTCL1Q9Y4B5 1905 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 PCM1Q15154 2024 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 C1GALT1C1LP0DN25 315 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 HOXB6P17509 224 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 PCMT1P22061 227 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 SOAT1P35610 550 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 ITGA1P56199 1179 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 C21orf58P58505 322 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 KCNJ10P78508 379 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 EMX1Q04741 257 aaPredicted RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 IL18R1Q13478 541 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 AQP6Q13520 282 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 DGCR6Q14129 220 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF658BQ4V348 819 aaPredicted RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 C9orf64Q5T6V5 341 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 Q6ZPB1 254 aaPredicted RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 MMAAQ8IVH4 418 aaKnown RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 PGBD3Q8N328 593 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 C11orf65Q8NCR3 313 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 OR52J3Q8NH60 311 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 SLC5A11Q8WWX8 675 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 OR8D1Q8WZ84 308 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 ZNF707Q96C28 371 aaPredicted RBP14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 COQ8BQ96D53 544 aa14.3□□□□□ -0.12
VIPAS39-202ENST00000343765 REPS1Q96D71 796 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms