RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 KCNJ10P78508 379 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 TIMM50Q3ZCQ8 353 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 LEXMQ3ZCV2 418 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 C5orf22Q49AR2 442 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 ADAMTSL2Q86TH1 951 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 ATP6V1C2Q8NEY4 427 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 NELL1Q92832 810 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 CINPQ9BW66 212 aaPredicted RBP14.34□□□□□ -0.11
CLCN1-201ENST00000343257 PCDHGA2Q9Y5H1 932 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 PRSS21Q9Y6M0 314 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 LTBP3Q9NS15 1303 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 MAGEB17A8MXT2 336 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 YY2O15391 372 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 TSPAN9O75954 239 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 COX7A2P14406 83 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 TWF1Q12792 350 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 DALRD3Q5D0E6 543 aaKnown RBP14.34□□□□□ -0.11
CLCN1-201ENST00000343257 C22orf42Q6IC83 251 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 LINGO4Q6UY18 593 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 ZNF367Q7RTV3 350 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 RNF130Q86XS8 419 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 SH3KBP1Q96B97 665 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 C7orf34Q96L11 122 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 TMEM45AQ9NWC5 275 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 TRAPPC4Q9Y296 219 aa14.34□□□□□ -0.11
CLCN1-201ENST00000343257 LOC102723532A0A0G2JNH3 316 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 SRCP12931 536 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 RPS5P46782 204 aaKnown RBP14.33□□□□□ -0.12
CLCN1-201ENST00000343257 CRYBA2P53672 197 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 GPR19Q15760 415 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 KCNJ9Q92806 393 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 PHF21AQ96BD5 680 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 CD244Q9BZW8 370 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 FZD4Q9ULV1 537 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 NDRG2Q9UN36 371 aaKnown RBP14.33□□□□□ -0.12
CLCN1-201ENST00000343257 POLHQ9Y253 713 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 EVI2BP34910 448 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 CNR2P34972 360 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 ARHGEF6Q15052 776 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 PTGES3Q15185 160 aaKnown RBP14.33□□□□□ -0.12
CLCN1-201ENST00000343257 TAF1AQ15573 450 aaPredicted RBP14.33□□□□□ -0.12
CLCN1-201ENST00000343257 ESCO2Q56NI9 601 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 OTOP2Q7RTS6 562 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 KRT73Q86Y46 540 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 APOBEC3FQ8IUX4 373 aaKnown RBP14.33□□□□□ -0.12
CLCN1-201ENST00000343257 SYT12Q8IV01 421 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 MSANTD3Q96H12 275 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 CRELD1Q96HD1 420 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 GABARAPL3Q9BY60 117 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 FAM126AQ9BYI3 521 aaPredicted RBP14.33□□□□□ -0.12
CLCN1-201ENST00000343257 MIXL1Q9H2W2 232 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 PLCXD1Q9NUJ7 323 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 FAM8A1Q9UBU6 413 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 HCN4Q9Y3Q4 1203 aa14.33□□□□□ -0.12
CLCN1-201ENST00000343257 ARL5CA6NH57 179 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 PCP4L1A6NKN8 68 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 BTN3A3O00478 584 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 TSPAN4O14817 238 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 ENTPD6O75354 484 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 POU4F3Q15319 338 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 C10orf120Q5SQS8 335 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 SLC35F1Q5T1Q4 408 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 CCSAPQ6IQ19 270 aaPredicted RBP14.32□□□□□ -0.12
CLCN1-201ENST00000343257 TSEN54Q7Z6J9 526 aaKnown RBP14.32□□□□□ -0.12
CLCN1-201ENST00000343257 SYT14Q8NB59 555 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 TADA1Q96BN2 335 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 REPS1Q96D71 796 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 TRIB3Q96RU7 358 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 POLR2J2Q9GZM3 115 aaKnown RBP14.32□□□□□ -0.12
CLCN1-201ENST00000343257 ZNF556Q9HAH1 456 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 RABL2AQ9UBK7 228 aaPredicted RBP14.32□□□□□ -0.12
CLCN1-201ENST00000343257 A0A075B6Q4 140 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 B8ZZF3 427 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 PSIP1O75475 530 aaKnown RBP14.32□□□□□ -0.12
CLCN1-201ENST00000343257 CCNB2O95067 398 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 PRLP01236 227 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 ALPIP09923 528 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 ODC1P11926 461 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 HLA-EP13747 358 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 IL1RNP18510 177 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 CRATP43155 626 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 LARS2Q15031 903 aaKnown RBP14.32□□□□□ -0.12
CLCN1-201ENST00000343257 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.32□□□□□ -0.12
CLCN1-201ENST00000343257 LAMTOR1Q6IAA8 161 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 WDR53Q7Z5U6 358 aaPredicted RBP14.32□□□□□ -0.12
CLCN1-201ENST00000343257 TCF25Q9BQ70 676 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 TPT1P8Q9HAU6 139 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 C3orf14Q9HBI5 128 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 FKBP14Q9NWM8 211 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 NDUFAF4Q9P032 175 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 DHRS7Q9Y394 339 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 RAI2Q9Y5P3 530 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 FAM240BA0A1B0GVZ2 78 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 CBX4O00257 560 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 RFXAPO00287 272 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 PRAMEF11O60813 436 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 SNAI1O95863 264 aaPredicted RBP14.32□□□□□ -0.12
CLCN1-201ENST00000343257 LAMP1P11279 417 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 ENPP1P22413 925 aa14.32□□□□□ -0.12
CLCN1-201ENST00000343257 PSMA1P25786 263 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms