RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 C8orf89P0DMQ9 161 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 MATN1P21941 496 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 KHKP50053 298 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ERVK-21P61565 698 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 NCS1P62166 190 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 MINDY4Q4G0A6 757 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 C2orf27AQ580R0 203 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 C6orf141Q5SZD1 244 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 PGM2L1Q6PCE3 622 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 Q6ZVL8 140 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-202ENST00000343090 AQP11Q8NBQ7 271 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 OR52B6Q8NGF0 335 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 FRMD6Q96NE9 622 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ZFP3Q96NJ6 502 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 SLC30A2Q9BRI3 323 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 SRMSQ9H3Y6 488 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 EVA1BQ9NVM1 165 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 NOX1Q9Y5S8 564 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 INPPL1O15357 1258 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ADAM23O75077 832 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 POP7O75817 140 aaKnown RBP7.81□□□□□ -1.16
UBE4B-202ENST00000343090 TFPIP10646 304 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 HLA-EP13747 358 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 HNF1BP35680 557 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 CLCNKAP51800 687 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 CRISP3P54108 245 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 OR4D2P58180 307 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 CDK6Q00534 326 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ABRAXAS2Q15018 415 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 SUZ12Q15022 739 aaKnown RBP7.81□□□□□ -1.16
UBE4B-202ENST00000343090 WSCD2Q2TBF2 565 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 AGAP7PQ5VUJ5 663 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 C22orf39Q6P5X5 142 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 LILRA2Q8N149 483 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 NXPE1Q8N323 547 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 MEIOBQ8N635 442 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 TMEM145Q8NBT3 493 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 GPR151Q8TDV0 419 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 C1orf74Q96LT6 269 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 BARD1Q99728 777 aaKnown RBP7.81□□□□□ -1.16
UBE4B-202ENST00000343090 HTATIP2Q9BUP3 242 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 SLC29A3Q9BZD2 475 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 COMMD9Q9P000 198 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ERVK-18Q9QC07 812 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ERVW-1Q9UQF0 538 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 RNF6Q9Y252 685 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ZNF451Q9Y4E5 1061 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 TIAM2Q8IVF5 1701 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 K7ERQ8 282 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 EIF3FO00303 357 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ERI3O43414 337 aaKnown RBP7.81□□□□□ -1.16
UBE4B-202ENST00000343090 PTTG1O95997 202 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ALPPP05187 535 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 RPS3P23396 243 aaKnown RBP eCLIP7.81□□□□□ -1.16
UBE4B-202ENST00000343090 CD40LGP29965 261 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 VIPR1P32241 457 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ALDH3B2P48448 385 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 PGDP52209 483 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 SH3BP2P78314 561 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 LRRC32Q14392 662 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 UAP1L1Q3KQV9 507 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 CEACAM20Q6UY09 585 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 RPTNQ6XPR3 784 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 DCP2Q8IU60 420 aaKnown RBP7.81□□□□□ -1.16
UBE4B-202ENST00000343090 CADM3Q8N126 398 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 TTC9BQ8N6N2 239 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 COX18Q8N8Q8 333 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ZNF248Q8NDW4 579 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 SHKBP1Q8TBC3 707 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 ASB12Q8WXK4 309 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 UFD1Q92890 307 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 RACGAP1Q9H0H5 632 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 SLC45A1Q9Y2W3 748 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 STON1Q9Y6Q2 735 aa7.81□□□□□ -1.16
UBE4B-202ENST00000343090 A0A075B6Q4 140 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 PRSS51A0A1B0GVH4 220 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 KMOO15229 486 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 B4GAT1O43505 415 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 UPK1BO75841 260 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 PDYNP01213 254 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 BMP2P12643 396 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ATF6P18850 670 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 UQCRC1P31930 480 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 CSTF2P33240 577 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 CCR8P51685 355 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 AP1S2P56377 157 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 SNRPD2P62316 118 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 KCNAB2Q13303 367 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 SPCS2Q15005 226 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 GPR68Q15743 365 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ATP6AP1Q15904 470 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 SPIN4Q56A73 249 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 DPY19L3Q6ZPD9 716 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RNF130Q86XS8 419 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 CMTR2Q8IYT2 770 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 UMODL1-AS1Q8N2C9 162 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 PMEPA1Q969W9 287 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 LGALS12Q96DT0 336 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 CCDC120Q96HB5 630 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms