RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SMARCD3Q6STE5 483 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CLECL1Q8IZS7 167 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 HS3ST5Q8IZT8 346 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 LGALS12Q96DT0 336 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CLEC4AQ9UMR7 237 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 N6AMT1Q9Y5N5 214 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 GPC6Q9Y625 555 aaPredicted RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 COLEC10Q9Y6Z7 277 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 MYO5AQ9Y4I1 1855 aaKnown RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 CEP290O15078 2479 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 HHLA1C9JL84 531 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 GJB3O75712 270 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 DNAJB5O75953 348 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 HIST1H2ABP04908 130 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 SLC10A3P09131 477 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 MPC1LP0DKB6 136 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 PSMA3P25788 255 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 SLC15A1P46059 708 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 KHKP50053 298 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 NPRL3Q12980 569 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 ZNF311Q5JNZ3 666 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 ZNF648Q5T619 568 aaPredicted RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 OTUD1Q5VV17 481 aaPredicted RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 RTL4Q6ZR62 310 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 HIST3H2AQ7L7L0 130 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 SAMD14Q8IZD0 417 aaPredicted RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 HIST1H2ACQ93077 130 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 ARMC5Q96C12 935 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CRELD1Q96HD1 420 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 FUNDC2Q9BWH2 189 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 RSPH9Q9H1X1 276 aaPredicted RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 MALT1Q9UDY8 824 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 INSL6Q9Y581 213 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 SIPA1L3O60292 1781 aaPredicted RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 ACOT8O14734 319 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 AREL1O15033 823 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 C1GALT1C1LP0DN25 315 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 RCVRNP35243 200 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 TSTQ16762 297 aaKnown RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 ATAT1Q5SQI0 421 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 C10orf62Q5T681 223 aaPredicted RBP6.95□□□□□ -1.3
VCAN-202ENST00000342785 SLC30A8Q8IWU4 369 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 CADM2Q8N3J6 435 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 SORCS1Q8WY21 1168 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 DOHHQ9BU89 302 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 OR51V1Q9H2C8 321 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 NEUROD4Q9HD90 331 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 IL1RAPQ9NPH3 570 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 MAP10Q9P2G4 905 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 TMEM98Q9Y2Y6 226 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 PCDHB11Q9Y5F2 797 aa6.95□□□□□ -1.3
VCAN-202ENST00000342785 ITGB4P16144 1822 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 H7BY64 318 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SLC1A7O00341 560 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SLC16A5O15375 505 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 STATHP02808 62 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 ADH5P11766 374 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 ZNF26P17031 533 aaPredicted RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 SLC5A2P31639 672 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MAGEA12P43365 314 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 AVPR1BP47901 424 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 TRIM71Q2Q1W2 868 aaKnown RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 FAM129CQ86XR2 697 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 DCUN1D3Q8IWE4 304 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 PRAP1Q96NZ9 151 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 BIRC8Q96P09 236 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 FEVQ99581 238 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MRPS30Q9NP92 439 aaKnown RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 P2RX2Q9UBL9 471 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 NME7Q9Y5B8 376 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 PCDHB14Q9Y5E9 798 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 AXIN1O15169 862 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 B4GAT1O43505 415 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 HCN1O60741 890 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 HSD3B1P14060 373 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 HSD3B2P26439 372 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 MPIP34949 423 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 SPINT3P49223 89 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 RBBP4Q09028 425 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 TCEANCQ8N8B7 351 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 TMEM102Q8N9M5 508 aaPredicted RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 SLC12A9Q9BXP2 914 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 ING3Q9NXR8 418 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 KCNK6Q9Y257 313 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 DUXAA6NLW8 204 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 GTPBP1O00178 669 aaKnown RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 LATS1O95835 1130 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 GNRH1P01148 92 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 RETP07949 1114 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 RPS3P23396 243 aaKnown RBP eCLIP6.94□□□□□ -1.3
VCAN-202ENST00000342785 ARRB2P32121 409 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 DNASE1L3Q13609 305 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 RAB33AQ14088 237 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 LASP1Q14847 261 aaKnown RBP6.94□□□□□ -1.3
VCAN-202ENST00000342785 TYSND1Q2T9J0 566 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 NDUFAF6Q330K2 333 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 C2orf27AQ580R0 203 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 BICRALQ6AI39 1079 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 KIAA1161Q6NSJ0 714 aa6.94□□□□□ -1.3
VCAN-202ENST00000342785 GRASPQ7Z6J2 395 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms