RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 ITCHQ96J02 903 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 ZDHHC5Q9C0B5 715 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 TCEAL2Q9H3H9 227 aaPredicted RBP11.29□□□□□ -0.6
C2orf88-201ENST00000340623 MIA3Q5JRA6 1907 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 STX4Q12846 297 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 HSPB3Q12988 150 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 CDKL4Q5MAI5 379 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 C6orf52Q5T4I8 152 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 PRMT9Q6P2P2 845 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 FIGLAQ6QHK4 219 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 NLRP8Q86W28 1048 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 ZFP28Q8NHY6 868 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 MAGEE2Q8TD90 523 aaPredicted RBP11.29□□□□□ -0.6
C2orf88-201ENST00000340623 C19orf43Q9BQ61 176 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 ANKHQ9HCJ1 492 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 EQTNQ9NQ60 294 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 ACTR10Q9NZ32 417 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 LRRC42Q9Y546 428 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 ASCC3Q8N3C0 2202 aaKnown RBP11.29□□□□□ -0.6
C2orf88-201ENST00000340623 CACNA1IQ9P0X4 2223 aa11.29□□□□□ -0.6
C2orf88-201ENST00000340623 GLOD5A6NK44 160 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 DUX1O43812 170 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 PSIP1O75475 530 aaKnown RBP11.28□□□□□ -0.6
C2orf88-201ENST00000340623 TSPAN12O95859 305 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 TAS2R50P59544 299 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 FOLH1Q04609 750 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 ANKRD26P1Q6NSI1 321 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 ZDHHC12Q96GR4 267 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 BMFQ96LC9 184 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 NSMCE2Q96MF7 247 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 GAREM1Q9H706 876 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 SPAG4Q9NPE6 437 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 LRIT1Q9P2V4 623 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 ASB1Q9Y576 335 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 NUP214P35658 2090 aaPredicted RBP11.28□□□□□ -0.6
C2orf88-201ENST00000340623 TMEM221A6NGB7 291 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 M0R296 226 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 B3GALT2O43825 422 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 BCKDHBP21953 392 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 ANXA11P50995 505 aaKnown RBP11.28□□□□□ -0.6
C2orf88-201ENST00000340623 ACTR3P61158 418 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 ABATP80404 500 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 DYNC1I2Q13409 638 aaKnown RBP11.28□□□□□ -0.6
C2orf88-201ENST00000340623 GPR18Q14330 331 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 SPIN4Q56A73 249 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.28□□□□□ -0.6
C2orf88-201ENST00000340623 STK32CQ86UX6 486 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 PQLC1Q8N2U9 271 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 EID2Q8N6I1 236 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 TTC29Q8NA56 475 aaPredicted RBP11.28□□□□□ -0.6
C2orf88-201ENST00000340623 TNIP2Q8NFZ5 429 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 RTKNQ9BST9 563 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 BRINP2Q9C0B6 783 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 CNOT6Q9ULM6 557 aaKnown RBP11.28□□□□□ -0.6
C2orf88-201ENST00000340623 FAM32AQ9Y421 112 aaKnown RBP11.28□□□□□ -0.6
C2orf88-201ENST00000340623 U3KQV3 271 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 IGLV3-16A0A075B6K0 115 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 PRAMEF33A0A0G2JMD5 474 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 KHNYNO15037 678 aaKnown RBP11.28□□□□□ -0.6
C2orf88-201ENST00000340623 CKMT2P17540 419 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 SLC19A1P41440 591 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 CSTF3Q12996 717 aaKnown RBP11.28□□□□□ -0.6
C2orf88-201ENST00000340623 CLCA4Q14CN2 919 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 DEFB134Q4QY38 66 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 ANXA8L1Q5VT79 327 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 REP15Q6BDI9 236 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 LSMEM2Q8N112 164 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 ZNF740Q8NDX6 193 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 OR6C2Q9NZP2 312 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 DLGAP4Q9Y2H0 992 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 WDR37Q9Y2I8 494 aa11.28□□□□□ -0.6
C2orf88-201ENST00000340623 ARNTLO00327 626 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 TAPBPO15533 448 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 CASP9P55211 416 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 ZXDAP98168 799 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 EMX2Q04743 252 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 SPANXN4Q5MJ08 99 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 OR4F3Q6IEY1 312 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 NOXRED1Q6NXP6 359 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 CYHR1Q6ZMK1 362 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 TAGAPQ8N103 731 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 RHBDD1Q8TEB9 315 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 DUSP26Q9BV47 211 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 RBCK1Q9BYM8 510 aa11.27□□□□□ -0.6
C2orf88-201ENST00000340623 MKI67P46013 3256 aaKnown RBP11.27□□□□□ -0.6
C2orf88-201ENST00000340623 BMP10O95393 424 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 NT5EP21589 574 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 PPP2R1BP30154 601 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 GALNT1Q10472 559 aaPredicted RBP11.27□□□□□ -0.61
C2orf88-201ENST00000340623 PDK3Q15120 406 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 KANK2Q63ZY3 851 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 C1orf210Q8IVY1 113 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 SDR16C5Q8N3Y7 309 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 DCUN1D5Q9BTE7 237 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 VPS4AQ9UN37 437 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 LTBP2Q14767 1821 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 DOCK4Q8N1I0 1966 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 PRPS1L1P21108 318 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 ARHGDIAP52565 204 aa11.27□□□□□ -0.61
C2orf88-201ENST00000340623 CDKL1Q00532 357 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms