RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 SLC25A46Q96AG3 418 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 UPRTQ96BW1 309 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 NIPSNAP1Q9BPW8 284 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 MARVELD1Q9BSK0 173 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 HEXA-AS1Q9H8Q6 139 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 GALNT9Q9HCQ5 603 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 PAK6Q9NQU5 681 aaPredicted RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 RBFOX1Q9NWB1 397 aaKnown RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 NUDT4Q9NZJ9 180 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 CNOT2Q9NZN8 540 aaKnown RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 PPT2Q9UMR5 302 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 NUP214P35658 2090 aaPredicted RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 WASH4PA8MWX3 477 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 WWP2O00308 870 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 CXCL11O14625 94 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 HLA-DQB1P01920 261 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 LGALS2P05162 132 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 MSL3P1P0C860 447 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 COL6A1P12109 1028 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 PKMP14618 531 aaKnown RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 KCNE1P15382 129 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 CLDN20P56880 219 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 RPS14P62263 151 aaKnown RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 ABATP80404 500 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 RHAGQ02094 409 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 GALEQ14376 348 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 AANATQ16613 207 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 SGO1Q5FBB7 561 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 CTSL3PQ5NE16 218 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 MARCH8Q5T0T0 291 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 OVOS1Q6IE37 1185 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 ERICH5Q6P6B1 374 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 PLEKHM3Q6ZWE6 761 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 PRSS42Q7Z5A4 293 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 KIF18BQ86Y91 864 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 UMODL1-AS1Q8N2C9 162 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 UTP15Q8TED0 518 aaKnown RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 PSMG2Q969U7 264 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 KIAA1143Q96AT1 154 aaPredicted RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 TPD52L3Q96J77 140 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 C8orf48Q96LL4 319 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 RTP3Q9BQQ7 232 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 PPIL3Q9H2H8 161 aaKnown RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 NLE1Q9NVX2 485 aaPredicted RBP9.07□□□□□ -0.96
NECAP1-201ENST00000339754 SH3BP4Q9P0V3 963 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 NLKQ9UBE8 527 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 SEC14L4Q9UDX3 406 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 DUSP12Q9UNI6 340 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 DLGAP4Q9Y2H0 992 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 HS3ST4Q9Y661 456 aa9.07□□□□□ -0.96
NECAP1-201ENST00000339754 PAPPA2Q9BXP8 1791 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 HYKKA2RU49 373 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 CLIC1O00299 241 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 BTN3A3O00478 584 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 TAPBPO15533 448 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 FABP7O15540 132 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 SLC43A1O75387 559 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 CDRT1O95170 752 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 FGF1P05230 155 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 CLEC2LP0C7M8 214 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 ARSBP15848 533 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 GPX2P18283 190 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 CD9P21926 228 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 PSMA1P25786 263 aaKnown RBP9.06□□□□□ -0.96
NECAP1-201ENST00000339754 HMGCLP35914 325 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 ALDH9A1P49189 494 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 MXD1Q05195 221 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 PPIGQ13427 754 aaKnown RBP eCLIP9.06□□□□□ -0.96
NECAP1-201ENST00000339754 MADCAM1Q13477 382 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 NDUFAF5Q5TEU4 345 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 RNF165Q6ZSG1 346 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 RASAL3Q86YV0 1011 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 ZNF366Q8N895 744 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 SOSTQ9BQB4 213 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 DPH2Q9BQC3 489 aaPredicted RBP9.06□□□□□ -0.96
NECAP1-201ENST00000339754 RACGAP1Q9H0H5 632 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 ELOVL2Q9NXB9 296 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.06□□□□□ -0.96
NECAP1-201ENST00000339754 RBPJLQ9UBG7 517 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 CLEC2DQ9UHP7 191 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 OGDHLQ9ULD0 1010 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 GINS2Q9Y248 185 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 VPS9D1Q9Y2B5 631 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 RPS10-NUDT3A0A1W2PQS6 291 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 SH3D21A4FU49 640 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 TNFRSF11BO00300 401 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 RFXANKO14593 260 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 TSPAN4O14817 238 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 PCDH17O14917 1159 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 NDUFA2O43678 99 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 ULK1O75385 1050 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 NAT2P11245 290 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 CKMT1AP12532 417 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 ENGP17813 658 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 HLA-DPA1P20036 260 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 CFL1P23528 166 aaKnown RBP9.06□□□□□ -0.96
NECAP1-201ENST00000339754 APEX1P27695 318 aaKnown RBP9.06□□□□□ -0.96
NECAP1-201ENST00000339754 BMP8BP34820 402 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 PGFP49763 221 aa9.06□□□□□ -0.96
NECAP1-201ENST00000339754 ZNF140P52738 457 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms