RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 TPT1P8Q9HAU6 139 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 FAM120CQ9NX05 1096 aaKnown RBP15.7■□□□□ 0.1
LITAF-201ENST00000339430 GNG14A0A1W2PPG7 69 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 TRIM64BA6NI03 449 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 C2CD4DB7Z1M9 353 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 SCAMP2O15127 329 aaKnown RBP15.7■□□□□ 0.1
LITAF-201ENST00000339430 AXIN1O15169 862 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 BCL10O95999 233 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 CLK3P49761 638 aaKnown RBP15.7■□□□□ 0.1
LITAF-201ENST00000339430 ARHGDIAP52565 204 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 EIF4HQ15056 248 aaKnown RBP15.7■□□□□ 0.1
LITAF-201ENST00000339430 OR7G3Q8NG95 312 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 NEIL2Q969S2 332 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 MAGEB10Q96LZ2 347 aaPredicted RBP15.7■□□□□ 0.1
LITAF-201ENST00000339430 TM9SF3Q9HD45 589 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 ZDHHC4Q9NPG8 344 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 SH3BP4Q9P0V3 963 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 RPS6KA6Q9UK32 745 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 FZD4Q9ULV1 537 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 SAMHD1Q9Y3Z3 626 aaKnown RBP15.7■□□□□ 0.1
LITAF-201ENST00000339430 KIAA1549LQ6ZVL6 1849 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 LRRK1Q38SD2 2015 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 H0YIV9 168 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 NPC1O15118 1278 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 KAT7O95251 611 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 ANGPTL1O95841 491 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 HTR1BP28222 390 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 EPHA2P29317 976 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 RPS13P62277 151 aaKnown RBP15.69■□□□□ 0.1
LITAF-201ENST00000339430 TUBA3CQ13748 450 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 RFX4Q33E94 735 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 FNDC3BQ53EP0 1204 aaKnown RBP15.69■□□□□ 0.1
LITAF-201ENST00000339430 ZNF805Q5CZA5 627 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 CPTPQ5TA50 214 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 LAIR1Q6GTX8 287 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 ANGPTL8Q6UXH0 198 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 TECPR1Q7Z6L1 1165 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 FNDC8Q8TC99 324 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 RAB2BQ8WUD1 216 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 ATL1Q8WXF7 558 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 MAGED4Q96JG8 741 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 CDX2Q99626 313 aaPredicted RBP15.69■□□□□ 0.1
LITAF-201ENST00000339430 CCM2Q9BSQ5 444 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 PCDHB11Q9Y5F2 797 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 DGKBQ9Y6T7 804 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 SLC5A10A0PJK1 596 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 SAP18O00422 153 aaKnown RBP15.69■□□□□ 0.1
LITAF-201ENST00000339430 KPNA3O00505 521 aaPredicted RBP15.69■□□□□ 0.1
LITAF-201ENST00000339430 PRMT3O60678 531 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 ZBTB11O95625 1053 aaPredicted RBP15.69■□□□□ 0.1
LITAF-201ENST00000339430 ITGAMP11215 1152 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 HLA-EP13747 358 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 RYKP34925 604 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 HNF4AP41235 474 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 TOP3AQ13472 1001 aaPredicted RBP15.69■□□□□ 0.1
LITAF-201ENST00000339430 GAB1Q13480 694 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 LDLRAP1Q5SW96 308 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 CATSPEREQ5SY80 951 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 LIPIQ6XZB0 460 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 PARS2Q7L3T8 475 aaKnown RBP15.69■□□□□ 0.1
LITAF-201ENST00000339430 GPR155Q7Z3F1 870 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 CROCCP3Q8IVE0 287 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 GLMNQ92990 594 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 RHNO1Q9BSD3 238 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 TRIT1Q9H3H1 467 aaKnown RBP15.69■□□□□ 0.1
LITAF-201ENST00000339430 KIF17Q9P2E2 1029 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 SH2B3Q9UQQ2 575 aa15.69■□□□□ 0.1
LITAF-201ENST00000339430 SH3PXD2BA1X283 911 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 MGAT4DA6NG13 374 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 MBTPS2O43462 519 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 SEMG1P04279 462 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 DNAJA1P31689 397 aaKnown RBP15.68■□□□□ 0.1
LITAF-201ENST00000339430 PRLHRP49683 370 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 VASPP50552 380 aaPredicted RBP15.68■□□□□ 0.1
LITAF-201ENST00000339430 GP2P55259 537 aaKnown RBP15.68■□□□□ 0.1
LITAF-201ENST00000339430 ZNF234Q14588 700 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 SPCS2Q15005 226 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.68■□□□□ 0.1
LITAF-201ENST00000339430 CBLL1Q75N03 491 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 DPPA4Q7L190 304 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 SYTL1Q8IYJ3 562 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 MUL1Q969V5 352 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 ERLEC1Q96DZ1 483 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 C11orf24Q96F05 449 aaPredicted RBP15.68■□□□□ 0.1
LITAF-201ENST00000339430 ERVK-18Q9QC07 812 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 GULP1Q9UBP9 304 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 PSME2Q9UL46 239 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 PCMT1P22061 227 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 MMP12P39900 470 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 EIF2DP41214 584 aaKnown RBP15.68■□□□□ 0.1
LITAF-201ENST00000339430 MAP2K4P45985 399 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 MLLT10P55197 1068 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 EMX1Q04741 257 aaPredicted RBP15.68■□□□□ 0.1
LITAF-201ENST00000339430 SMAD4Q13485 552 aaKnown RBP15.68■□□□□ 0.1
LITAF-201ENST00000339430 AQP6Q13520 282 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 STARD3Q14849 445 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 SMN1Q16637 294 aaKnown RBP15.68■□□□□ 0.1
LITAF-201ENST00000339430 ZC3H12BQ5HYM0 836 aaKnown RBP15.68■□□□□ 0.1
LITAF-201ENST00000339430 KDM4DQ6B0I6 523 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 ERICH5Q6P6B1 374 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms