RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 GADD45GO95257 159 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 ZNF8P17098 575 aaPredicted RBP7.94□□□□□ -1.14
HPS4-201ENST00000336873 TM4SF4P48230 202 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 CLCNKAP51800 687 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 TIAL1Q01085 375 aaKnown RBP eCLIP7.94□□□□□ -1.14
HPS4-201ENST00000336873 MED27Q6P2C8 311 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 DCP2Q8IU60 420 aaKnown RBP7.94□□□□□ -1.14
HPS4-201ENST00000336873 PXYLP1Q8TE99 480 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 NEIL2Q969S2 332 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 F2RL3Q96RI0 385 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 AMBRA1Q9C0C7 1298 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 FZD3Q9NPG1 666 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 ERVK13-1Q9NX77 482 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 LHX3Q9UBR4 397 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 POU2F3Q9UKI9 436 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 PHF24Q9UPV7 400 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 REV3LO60673 3130 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 EYSQ5T1H1 3165 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 STK25O00506 426 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 MATN4O95460 622 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 TSPAN12O95859 305 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 HMGA1P17096 107 aaKnown RBP7.94□□□□□ -1.14
HPS4-201ENST00000336873 PSMB5P28074 263 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 HOXD12P35452 270 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 MAPK9P45984 424 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 DGKGP49619 791 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 CREMQ03060 361 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 EMX1Q04741 257 aaPredicted RBP7.94□□□□□ -1.14
HPS4-201ENST00000336873 IRF5Q13568 498 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 VMACQ2NL98 169 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 TMEM31Q5JXX7 168 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 DLEU7Q6UYE1 221 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 B3GLCTQ6Y288 498 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 TEX26Q8N6G2 289 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 AQP11Q8NBQ7 271 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 ABHD11Q8NFV4 315 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 ZNF641Q96N77 438 aaPredicted RBP7.94□□□□□ -1.14
HPS4-201ENST00000336873 GFM1Q96RP9 751 aaKnown RBP7.94□□□□□ -1.14
HPS4-201ENST00000336873 SEMA3GQ9NS98 782 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 H2AFY2Q9P0M6 372 aaPredicted RBP7.94□□□□□ -1.14
HPS4-201ENST00000336873 OR1A2Q9Y585 309 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 SVILO95425 2214 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 CACNA1GO43497 2377 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D3DA0A087WVF3 549 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D3IA0A087WXS9 549 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D3EA0A087X179 549 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D3KA0A087X1G2 549 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D3FA6NER0 549 aaPredicted RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 ZNF860A6NHJ4 632 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 HIDE1A8MVS5 230 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D3LB9A6J9 549 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 SNPHO15079 494 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 MED26O95402 600 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 SOD2P04179 222 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 ALPLP05186 524 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D3HP0C7X1 549 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 PRPS1L1P21108 318 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 HTR1BP28222 390 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 HOXC13P31276 330 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 AVPR1BP47901 424 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 HLCSP50747 726 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 ABHD18Q0P651 414 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 SCARB2Q14108 478 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TYSND1Q2T9J0 566 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D3GQ6DHY5 549 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D3CQ6IPX1 549 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TRAF7Q6Q0C0 670 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 ZNF852Q6ZMS4 543 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 CROCCP3Q8IVE0 287 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D3Q8IZP1 549 aaPredicted RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 IQCF1Q8N6M8 205 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TERB1Q8NA31 727 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TMEM145Q8NBT3 493 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 FNDC8Q8TC99 324 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 C17orf62Q9BQA9 187 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBC1D17Q9HA65 648 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TIGARQ9NQ88 270 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 THG1LQ9NWX6 298 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 INTS6Q9UL03 887 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 BTBD3Q9Y2F9 522 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 OARD1Q9Y530 152 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 MYL12BO14950 172 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TMCC2O75069 709 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 CDC42P60953 191 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 PTSQ03393 145 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 GALNT1Q10472 559 aaPredicted RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 ST3GAL4Q11206 333 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 HYAL2Q12891 473 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 LASP1Q14847 261 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 FAM214AQ32MH5 1076 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 ARMCX4Q5H9R4 360 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 SVOPQ8N4V2 548 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 SLC5A8Q8N695 610 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 LGALS12Q96DT0 336 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 MTIF3Q9H2K0 278 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 DEC1Q9P2X7 70 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 GPR52Q9Y2T5 361 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 SPTBN5Q9NRC6 3674 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 TRBC2A0A5B9 178 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 GABRR3A8MPY1 467 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms