RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 REEP1Q9H902 201 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 MARK1Q9P0L2 795 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 DKK3Q9UBP4 350 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 PNMA8BQ9ULN7 279 aaPredicted RBP18.19■□□□□ 0.5
RFTN1-201ENST00000334133 ASF1AQ9Y294 204 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 DYRK1BQ9Y463 629 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 C1orf226A1L170 272 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 QSOX1O00391 747 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 RTCAO00442 366 aaKnown RBP18.19■□□□□ 0.5
RFTN1-201ENST00000334133 LILRB5O75023 590 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 GCM2O75603 506 aaPredicted RBP18.19■□□□□ 0.5
RFTN1-201ENST00000334133 HOXA9P31269 272 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 SPCS2Q15005 226 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 C9orf64Q5T6V5 341 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 GTF2IRD2BQ6EKJ0 949 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 EIF3MQ7L2H7 374 aaKnown RBP18.19■□□□□ 0.5
RFTN1-201ENST00000334133 GTF2IRD2Q86UP8 949 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 VPS37AQ8NEZ2 397 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 RAD9AQ99638 391 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 KRT84Q9NSB2 600 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 ZNF701M0R085 212 aaPredicted RBP18.18■□□□□ 0.5
RFTN1-201ENST00000334133 RRM2P31350 389 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 DNAJA1P31689 397 aaKnown RBP18.18■□□□□ 0.5
RFTN1-201ENST00000334133 GJA8P48165 433 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 AQP6Q13520 282 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 COL9A2Q14055 689 aaPredicted RBP18.18■□□□□ 0.5
RFTN1-201ENST00000334133 GPR153Q6NV75 609 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 NRBF2Q96F24 287 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 AMBNQ9NP70 447 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 CDH7Q9ULB5 785 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 CARNS1A5YM72 827 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 HEPACAM2A8MVW5 462 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 PRMT3O60678 531 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 PFDN1O60925 122 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 SOAT1P35610 550 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 GP2P55259 537 aaKnown RBP18.18■□□□□ 0.5
RFTN1-201ENST00000334133 EMX1Q04741 257 aaPredicted RBP18.18■□□□□ 0.5
RFTN1-201ENST00000334133 MPEG1Q2M385 716 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 ZNF557Q8N988 423 aaPredicted RBP18.18■□□□□ 0.5
RFTN1-201ENST00000334133 SNRNP27Q8WVK2 155 aaKnown RBP18.18■□□□□ 0.5
RFTN1-201ENST00000334133 BRF2Q9HAW0 419 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 PRDM8Q9NQV8 689 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 BLOC1S6Q9UL45 172 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 SERTM1A2A2V5 107 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 GRXCR1A8MXD5 290 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 TOR1BO14657 336 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 ZNF197O14709 1029 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 SLC16A6O15403 523 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 SUV39H1O43463 412 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 ADRB3P13945 408 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 SPIN4Q56A73 249 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 KDM4DQ6B0I6 523 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 MSANTD1Q6ZTZ1 278 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 GPR155Q7Z3F1 870 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 NLRP8Q86W28 1048 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 CCDC71Q8IV32 467 aaPredicted RBP18.18■□□□□ 0.5
RFTN1-201ENST00000334133 SMYD1Q8NB12 490 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 OR9A1PQ8NGU1 263 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 SMG7Q92540 1137 aaKnown RBP18.18■□□□□ 0.5
RFTN1-201ENST00000334133 KCNC2Q96PR1 638 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 SLC35A5Q9BS91 424 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 C5AR2Q9P296 337 aa18.18■□□□□ 0.5
RFTN1-201ENST00000334133 PLXND1Q9Y4D7 1925 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 VIPP01282 170 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 PRNPP04156 253 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 C1GALT1C1LP0DN25 315 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 FPR1P21462 350 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 ASMTP46597 345 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 DGKEP52429 567 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 KCNJ10P78508 379 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 ADGRD2Q7Z7M1 963 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 CELF5Q8N6W0 485 aaKnown RBP18.17■□□□□ 0.5
RFTN1-201ENST00000334133 ZNF784Q8NCA9 323 aaPredicted RBP18.17■□□□□ 0.5
RFTN1-201ENST00000334133 TUBA1CQ9BQE3 449 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 DMRT3Q9NQL9 472 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 RAD18Q9NS91 495 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 SLC23A2Q9UGH3 650 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 CEP290O15078 2479 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 TMEM229AB2RXF0 380 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 SLC9A3R1O14745 358 aaPredicted RBP18.17■□□□□ 0.5
RFTN1-201ENST00000334133 FGF19O95750 216 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 FADS2O95864 444 aaKnown RBP18.17■□□□□ 0.5
RFTN1-201ENST00000334133 BCL10O95999 233 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 JUNBP17275 347 aaPredicted RBP18.17■□□□□ 0.5
RFTN1-201ENST00000334133 IL1RNP18510 177 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 ZNF234Q14588 700 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 NPTX1Q15818 432 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 ERICH5Q6P6B1 374 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 NFKBIDQ8NI38 313 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 MIPOL1Q8TD10 442 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 MAGEB10Q96LZ2 347 aaPredicted RBP18.17■□□□□ 0.5
RFTN1-201ENST00000334133 SNX8Q9Y5X2 465 aa18.17■□□□□ 0.5
RFTN1-201ENST00000334133 LINC01553A4QN01 128 aa18.16■□□□□ 0.5
RFTN1-201ENST00000334133 SCAMP1O15126 338 aa18.16■□□□□ 0.5
RFTN1-201ENST00000334133 STATHP02808 62 aa18.16■□□□□ 0.5
RFTN1-201ENST00000334133 SEMG1P04279 462 aa18.16■□□□□ 0.5
RFTN1-201ENST00000334133 SRPRAP08240 638 aaKnown RBP18.16■□□□□ 0.5
RFTN1-201ENST00000334133 RPS26P62854 115 aaKnown RBP18.16■□□□□ 0.5
RFTN1-201ENST00000334133 ZNF763Q0D2J5 394 aa18.16■□□□□ 0.5
RFTN1-201ENST00000334133 DHRS4L2Q6PKH6 230 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms