RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 C1SP09871 688 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 RRASP10301 218 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 HLA-DPA1P20036 260 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 LIMS1P48059 325 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 RAB25P57735 213 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 MTAPQ13126 283 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 ANGPT1Q15389 498 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 LCN1P1Q5VSP4 162 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 SHEQ5VZ18 495 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 PLET1Q6UQ28 207 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 TMEM107Q6UX40 140 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 LAS2Q8IYD9 372 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 RGL4Q8IZJ4 473 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 SLC5A8Q8N695 610 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 OR7D4Q8NG98 312 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 LILRB1Q8NHL6 650 aaPredicted RBP7.53□□□□□ -1.2
CD46-201ENST00000322875 ENKURQ8TC29 256 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 TRPM4Q8TD43 1214 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 LINGO1Q96FE5 620 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 NIPSNAP1Q9BPW8 284 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 MED10Q9BTT4 135 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 HTATIP2Q9BUP3 242 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 R3HDMLQ9H3Y0 253 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 MYOZ2Q9NPC6 264 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 PRDM5Q9NQX1 630 aaPredicted RBP7.53□□□□□ -1.2
CD46-201ENST00000322875 SNTG1Q9NSN8 517 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 GPRC5BQ9NZH0 403 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 CDH10Q9Y6N8 788 aa7.53□□□□□ -1.2
CD46-201ENST00000322875 PCDH17O14917 1159 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 SCN2BO60939 215 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 ATG13O75143 517 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 CSO75390 466 aaKnown RBP7.52□□□□□ -1.21
CD46-201ENST00000322875 GCM2O75603 506 aaPredicted RBP7.52□□□□□ -1.21
CD46-201ENST00000322875 PPM1BO75688 479 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 GJB3O75712 270 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 HAPLN1P10915 354 aaPredicted RBP7.52□□□□□ -1.21
CD46-201ENST00000322875 PRKACAP17612 351 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 SOX3P41225 446 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 CSTF3Q12996 717 aaKnown RBP7.52□□□□□ -1.21
CD46-201ENST00000322875 PPIGQ13427 754 aaKnown RBP eCLIP7.52□□□□□ -1.212e-9■■□□□ 11.8
CD46-201ENST00000322875 GALEQ14376 348 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 MARC1Q5VT66 337 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 OR8H1Q8NGG4 311 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 HMCESQ96FZ2 354 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 KLHL5Q96PQ7 755 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 FAM193BQ96PV7 902 aaPredicted RBP7.52□□□□□ -1.21
CD46-201ENST00000322875 IPPKQ9H8X2 491 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 ERVMER34-1Q9H9K5 563 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 LRTM1Q9HBL6 345 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 B3GAT2Q9NPZ5 323 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 ELOVL2Q9NXB9 296 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 MPP6Q9NZW5 540 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 NDUFAF4Q9P032 175 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 FTSJ1Q9UET6 329 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 HS3ST4Q9Y661 456 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 PTCH2Q9Y6C5 1203 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 PTPRDP23468 1912 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 MYBPHLA2RUH7 354 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 NPIPB8E9PQR5 432 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 I3L521 148 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 OR1I1O60431 355 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 CELF2O95319 508 aaKnown RBP7.52□□□□□ -1.21
CD46-201ENST00000322875 PRPH2P23942 346 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 AKAP5P24588 427 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 PTBP1P26599 531 aaKnown RBP eCLIP7.52□□□□□ -1.211e-8■■□□□ 11.8
CD46-201ENST00000322875 CLCN7P51798 805 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 IL2P60568 153 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 HMGCS1Q01581 520 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 SMARCB1Q12824 385 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 ALG1LQ6GMV1 187 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 ABI3BPQ7Z7G0 1075 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 CD244Q9BZW8 370 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 PPA2Q9H2U2 334 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 SYNDIG1Q9H7V2 258 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 PDGFCQ9NRA1 345 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 KCMF1Q9P0J7 381 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 ZMAT5Q9UDW3 170 aaKnown RBP7.52□□□□□ -1.21
CD46-201ENST00000322875 NDOR1Q9UHB4 597 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 DLGAP4Q9Y2H0 992 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 ZNF451Q9Y4E5 1061 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 NLRC5Q86WI3 1866 aa7.52□□□□□ -1.21
CD46-201ENST00000322875 ZAR1LA6NP61 321 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 SGK494L7N484 410 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 CHP2O43745 196 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 NIPSNAP2O75323 286 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 GLUD1P00367 558 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 LGALS2P05162 132 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 HBQ1P09105 142 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 ANXA8P13928 327 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 PKMP14618 531 aaKnown RBP7.51□□□□□ -1.21
CD46-201ENST00000322875 ATF4P18848 351 aaPredicted RBP7.51□□□□□ -1.21
CD46-201ENST00000322875 DDCP20711 480 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 RPS3P23396 243 aaKnown RBP eCLIP7.51□□□□□ -1.211e-9■■□□□ 13.8
CD46-201ENST00000322875 MAN2A2P49641 1150 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 CDKN1CP49918 316 aaPredicted RBP7.51□□□□□ -1.21
CD46-201ENST00000322875 ETV1P50549 477 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 CLCN4P51793 760 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 AGFG1P52594 562 aaKnown RBP7.51□□□□□ -1.21
CD46-201ENST00000322875 ARPP19P56211 112 aa7.51□□□□□ -1.21
CD46-201ENST00000322875 RPS14P62263 151 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms