RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 CT55Q8WUE5 264 aa16.66■□□□□ 0.26
SWSAP1-201ENST00000312423 MOCOSQ96EN8 888 aa16.66■□□□□ 0.26
SWSAP1-201ENST00000312423 C10orf90Q96M02 699 aa16.66■□□□□ 0.26
SWSAP1-201ENST00000312423 GBP5Q96PP8 586 aa16.66■□□□□ 0.26
SWSAP1-201ENST00000312423 CDK15Q96Q40 435 aa16.66■□□□□ 0.26
SWSAP1-201ENST00000312423 DPH2Q9BQC3 489 aaPredicted RBP16.66■□□□□ 0.26
SWSAP1-201ENST00000312423 PITHD1Q9GZP4 211 aaPredicted RBP16.66■□□□□ 0.26
SWSAP1-201ENST00000312423 COPG2Q9UBF2 871 aa16.66■□□□□ 0.26
SWSAP1-201ENST00000312423 CROTQ9UKG9 612 aa16.66■□□□□ 0.26
SWSAP1-201ENST00000312423 LOC101059948A0A1B0GTJ6 334 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 C9J4A7 227 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 OR7A17O14581 309 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 WFS1O76024 890 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 CASP2P42575 452 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 SRSF6Q13247 344 aaKnown RBP16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 UNC50Q53HI1 259 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 GARNL3Q5VVW2 1013 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 LIPJQ5W064 366 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 GRHL2Q6ISB3 625 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 MED27Q6P2C8 311 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 DTWD1Q8N5C7 304 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 KCT2Q8NC54 265 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 TRPC4APQ8TEL6 797 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 UBE2E3Q969T4 207 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 TM4SF19Q96DZ7 209 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 C1QTNF3Q9BXJ4 246 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 DRC3Q9H069 523 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 NT5DC2Q9H857 520 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 ZBTB26Q9HCK0 441 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 KCNK9Q9NPC2 374 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 ENAMQ9NRM1 1142 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 IFT80Q9P2H3 777 aaPredicted RBP16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 GPN3Q9UHW5 284 aaPredicted RBP16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 MAU2Q9Y6X3 613 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 ACACBO00763 2458 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 GMNCA6NCL1 334 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 MED26O95402 600 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 CLDN9O95484 217 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 OTCP00480 354 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 LIFP15018 202 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 ITPKBP27987 946 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 HNF4AP41235 474 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 GCGRP47871 477 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 OR1D4P47884 311 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 EMP3P54852 163 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 CLCQ05315 142 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 PWP1Q13610 501 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 DDX39BQ13838 428 aaKnown RBP16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 CPSF6Q16630 551 aaKnown RBP eCLIP16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 NKAIN1Q4KMZ8 207 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 CFAP157Q5JU67 520 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 LCN10Q6JVE6 187 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 L3HYPDHQ96EM0 354 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 CCNL2Q96S94 520 aaPredicted RBP16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 ZNF490Q9ULM2 529 aaPredicted RBP16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 RNF11Q9Y3C5 154 aa16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 URB1O60287 2271 aaKnown RBP16.65■□□□□ 0.26
SWSAP1-201ENST00000312423 A0A0A6YYC8 382 aaPredicted RBP16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 I3L1I5 382 aaPredicted RBP16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 TYROBPO43914 113 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 UGDHO60701 494 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 GSTM2P28161 218 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 SEC24CP53992 1094 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 PCDH1Q08174 1060 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 DNASE1L3Q13609 305 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 PCLAFQ15004 111 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 ARHGAP40Q5TG30 622 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 MLIPQ5VWP3 458 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 ZNF385CQ66K41 422 aaPredicted RBP16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 ADNP2Q6IQ32 1131 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 C6orf89Q6UWU4 347 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 MILR1Q7Z6M3 343 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 C10orf107Q8IVU9 208 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 NT5CQ8TCD5 201 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 COL26A1Q96A83 441 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 MMABQ96EY8 250 aaPredicted RBP16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 RABEP2Q9H5N1 569 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 OXSMQ9NWU1 459 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 CDC14AQ9UNH5 594 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 MRPS2Q9Y399 296 aaKnown RBP16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 ACTL7BQ9Y614 415 aa16.64■□□□□ 0.25
SWSAP1-201ENST00000312423 FER1L5A0AVI2 2057 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 A0A087WV48 116 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 URADA6NGE7 173 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 PIM1P11309 404 aaPredicted RBP16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 IL1RNP18510 177 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 NAGLUP54802 743 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 RPS15P62841 145 aaKnown RBP16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 TLE3Q04726 772 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 TRAF3Q13114 568 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 TOR1AIP1Q5JTV8 583 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 LIPMQ5VYY2 423 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 TMEM214Q6NUQ4 689 aaKnown RBP16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 PRMT9Q6P2P2 845 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 OR7G3Q8NG95 312 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 CREB3L4Q8TEY5 395 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 REPS1Q96D71 796 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 C17orf62Q9BQA9 187 aa16.63■□□□□ 0.25
SWSAP1-201ENST00000312423 EFHD1Q9BUP0 239 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms