RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PLA2G15Q8NCC3 412 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 PJA1Q8NG27 643 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 OR9A1PQ8NGU1 263 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 KLK6Q92876 244 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 TM9SF3Q9HD45 589 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 TM7SF3Q9NS93 570 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 USE1Q9NZ43 259 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 C5AR2Q9P296 337 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 PCYT1BQ9Y5K3 369 aaPredicted RBP11.1□□□□□ -0.63
PTPN2-201ENST00000309660 CHD9Q3L8U1 2897 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 GRXCR1A8MXD5 290 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 KIAA0355O15063 1070 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 LATO43561 262 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 FAM20BO75063 409 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 ADRB3P13945 408 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 TAP2Q03519 686 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF763Q0D2J5 394 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 GET4Q7L5D6 327 aaPredicted RBP11.1□□□□□ -0.63
PTPN2-201ENST00000309660 C11orf65Q8NCR3 313 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF420Q8TAQ5 688 aaPredicted RBP11.1□□□□□ -0.63
PTPN2-201ENST00000309660 KCNC2Q96PR1 638 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 FUNDC2Q9BWH2 189 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 IRAK3Q9Y616 596 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 KNL1Q8NG31 2342 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 DENND4CQ5VZ89 1909 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 A0A0J9YVX5 310 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 PRMT3O60678 531 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 HOXB9P17482 250 aaPredicted RBP11.1□□□□□ -0.63
PTPN2-201ENST00000309660 GJA8P48165 433 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 IDH2P48735 452 aaKnown RBP11.1□□□□□ -0.63
PTPN2-201ENST00000309660 RPS26P62854 115 aaKnown RBP11.1□□□□□ -0.63
PTPN2-201ENST00000309660 PHEXP78562 749 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 RFX4Q33E94 735 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 PAGE2BQ5JRK9 111 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 LAIR2Q6ISS4 152 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 FAM83HQ6ZRV2 1179 aaPredicted RBP11.1□□□□□ -0.63
PTPN2-201ENST00000309660 AHSA2Q719I0 299 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 EIF3MQ7L2H7 374 aaKnown RBP11.1□□□□□ -0.63
PTPN2-201ENST00000309660 NFKBIDQ8NI38 313 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 SLC5A11Q8WWX8 675 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 SUSD6Q92537 303 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 OTUB2Q96DC9 234 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 VPS35Q96QK1 796 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 SIRT5Q9NXA8 310 aa11.1□□□□□ -0.63
PTPN2-201ENST00000309660 HEPACAM2A8MVW5 462 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 M0QX08 132 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 SOD1P00441 154 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 CISD3P0C7P0 127 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 C1GALT1C1LP0DN25 315 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 FPR1P21462 350 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 CLK3P49761 638 aaKnown RBP11.09□□□□□ -0.63
PTPN2-201ENST00000309660 EMP3P54852 163 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 OCA2Q04671 838 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 CAMK1Q14012 370 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF234Q14588 700 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 PRSS36Q5K4E3 855 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 ANXA8L1Q5VT79 327 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 DUS1LQ6P1R4 473 aaKnown RBP11.09□□□□□ -0.63
PTPN2-201ENST00000309660 GALNT18Q6P9A2 607 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 PIWIL3Q7Z3Z3 882 aaKnown RBP11.09□□□□□ -0.63
PTPN2-201ENST00000309660 RNF130Q86XS8 419 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 PLD3Q8IV08 490 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF547Q8IVP9 402 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 HOMEZQ8IX15 550 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 CHPFQ8IZ52 775 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 CXorf40AQ8TE69 158 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 RORBQ92753 470 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 REPS1Q96D71 796 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 LRIG1Q96JA1 1093 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 SCN3BQ9NY72 215 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 TAC3Q9UHF0 121 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 RAB23Q9ULC3 237 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 F5P12259 2224 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 CPNE6O95741 557 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 CDH12P55289 794 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 FPGSQ05932 587 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 NPTX1Q15818 432 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 CBLL1Q75N03 491 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 SETD9Q8NE22 299 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 OR52E4Q8NGH9 312 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 UTP15Q8TED0 518 aaKnown RBP11.09□□□□□ -0.63
PTPN2-201ENST00000309660 ZFP90Q8TF47 636 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 CHTF18Q8WVB6 975 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 STARD8Q92502 1023 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 REEP4Q9H6H4 257 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 BRF2Q9HAW0 419 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 DKK3Q9UBP4 350 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 NINQ8N4C6 2090 aa11.09□□□□□ -0.63
PTPN2-201ENST00000309660 SPINT1O43278 529 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 VIPP01282 170 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 SRPRAP08240 638 aaKnown RBP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 IL3P08700 152 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 PSMB5P28074 263 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 GSTM2P28161 218 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 HTR1BP28222 390 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 PNLIPRP1P54315 467 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 SPIBQ01892 262 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 ELP6Q0PNE2 266 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 GANABQ14697 944 aaKnown RBP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 HNRNPA1L2Q32P51 320 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms