RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 SCAMP1O15126 338 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 SEC24DO94855 1032 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-201ENST00000292808 SLC35G4P0C7Q5 338 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 PRPS1L1P21108 318 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 CLDN2P57739 230 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 MTAPQ13126 283 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 CYP2A13Q16696 494 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 SCARF2Q96GP6 870 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-201ENST00000292808 FBXL20Q96IG2 436 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 SOX17Q9H6I2 414 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-201ENST00000292808 RUVBL1Q9Y265 456 aaKnown RBP13.49□□□□□ -0.25
ABCF3-201ENST00000292808 PI15O43692 258 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 TRMUO75648 421 aaKnown RBP13.49□□□□□ -0.25
ABCF3-201ENST00000292808 PRKD3O94806 890 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 CPSF4O95639 269 aaKnown RBP13.49□□□□□ -0.25
ABCF3-201ENST00000292808 SNAP29O95721 258 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 GABRG2P18507 467 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 ALDH3A2P51648 485 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 HNRNPFP52597 415 aaKnown RBP13.49□□□□□ -0.25
ABCF3-201ENST00000292808 ARSFP54793 590 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 WNT3P56703 355 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 ZBED5Q49AG3 693 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 KIAA1324Q6UXG2 1013 aaKnown RBP13.49□□□□□ -0.25
ABCF3-201ENST00000292808 FAM129CQ86XR2 697 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 LINC01555Q8NAE3 123 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 NETO1Q8TDF5 533 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 SETD7Q8WTS6 366 aaKnown RBP13.49□□□□□ -0.25
ABCF3-201ENST00000292808 ASB12Q8WXK4 309 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 NELL1Q92832 810 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 TMBIM1Q969X1 311 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 SLC47A1Q96FL8 570 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 ACAT2Q9BWD1 397 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 DMRT3Q9NQL9 472 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 ACSL5Q9ULC5 683 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 BTBD3Q9Y2F9 522 aa13.49□□□□□ -0.25
ABCF3-201ENST00000292808 MAGED1Q9Y5V3 778 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-201ENST00000292808 PLXND1Q9Y4D7 1925 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 TRIOBPQ9H2D6 2365 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 FAM220BPB1ANY3 271 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 C10orf142B7Z368 130 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 H0Y8X5 98 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 FPGTO14772 594 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 YY2O15391 372 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 SCN2BO60939 215 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 CREG1O75629 220 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 MYO1DO94832 1006 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 KLHL18O94889 574 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 HPRP00739 348 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 HOXB6P17509 224 aaKnown RBP13.48□□□□□ -0.25
ABCF3-201ENST00000292808 IL1RNP18510 177 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 PSMB5P28074 263 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 TPMTP51580 245 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 ESRRGP62508 458 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 SLC14A1Q13336 389 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 DAG1Q14118 895 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 CLCA4Q14CN2 919 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 ARMCX6Q7L4S7 300 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 CALHM3Q86XJ0 350 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 ERI1Q8IV48 349 aaKnown RBP13.48□□□□□ -0.25
ABCF3-201ENST00000292808 OR10Q1Q8NGQ4 319 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 RDH12Q96NR8 316 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 PANX1Q96RD7 426 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 C1QTNF7Q9BXJ2 289 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 TRIT1Q9H3H1 467 aaKnown RBP13.48□□□□□ -0.25
ABCF3-201ENST00000292808 OSGEPL1Q9H4B0 414 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 RMI1Q9H9A7 625 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 DNAJB9Q9UBS3 223 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 ERVK-11Q9UQG0 969 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 TCRBV21S2A2A0A5A6 115 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 KLHL33A6NCF5 533 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 ZNF701M0R085 212 aaPredicted RBP13.48□□□□□ -0.25
ABCF3-201ENST00000292808 SERPINA1P01009 418 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 RETP07949 1114 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 PCSK6P29122 969 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 GZMMP51124 257 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 IST1P53990 364 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 C21orf58P58505 322 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 SMAD4Q13485 552 aaKnown RBP13.48□□□□□ -0.25
ABCF3-201ENST00000292808 LAPTM5Q13571 262 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 ARHGAP19Q14CB8 494 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 DUOXA1Q1HG43 343 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 HKDC1Q2TB90 917 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 ZNF621Q6ZSS3 439 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 LPCAT2Q7L5N7 544 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 CLECL1Q8IZS7 167 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 DTNBP1Q96EV8 351 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 METTL2AQ96IZ6 378 aaKnown RBP13.48□□□□□ -0.25
ABCF3-201ENST00000292808 C12orf66Q96MD2 445 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 CUEDC1Q9NWM3 386 aaPredicted RBP13.48□□□□□ -0.25
ABCF3-201ENST00000292808 TAC3Q9UHF0 121 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 PNMA8BQ9ULN7 279 aaPredicted RBP13.48□□□□□ -0.25
ABCF3-201ENST00000292808 MMP17Q9ULZ9 603 aa13.48□□□□□ -0.25
ABCF3-201ENST00000292808 EXO1Q9UQ84 846 aaKnown RBP13.48□□□□□ -0.25
ABCF3-201ENST00000292808 PRAMEF33A0A0G2JMD5 474 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 FOXE1O00358 373 aaPredicted RBP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 TBX6O95947 436 aaPredicted RBP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 ALBP02768 609 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 ALPLP05186 524 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 ANXA4P09525 319 aaPredicted RBP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 LAMP1P11279 417 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms