RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 DEFB115Q30KQ5 88 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 IQCCQ4KMZ1 466 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 DCST1Q5T197 706 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 DPY19L3Q6ZPD9 716 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 TAS1R1Q7RTX1 841 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 PIWIL3Q7Z3Z3 882 aaKnown RBP12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 CNTN4Q8IWV2 1026 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 IPCEF1Q8WWN9 437 aaPredicted RBP12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 SUSD6Q92537 303 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 BIRC8Q96P09 236 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 SEMA3GQ9NS98 782 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 COL4A5P29400 1685 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 TRAV6A0A075B6T7 132 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 L7N2F9 121 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 NUPL2O15504 423 aaKnown RBP12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 PDPK1O15530 556 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 ADAM12O43184 909 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 MITFO75030 526 aaPredicted RBP12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 ATG13O75143 517 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 CDRT1O95170 752 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 RASAL1O95294 804 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 ADH1AP07327 375 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 PPIBP23284 216 aaKnown RBP12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 BDKRB1P46663 353 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 ZXDBP98169 803 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 COLGALT2Q8IYK4 626 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 ANKFN1Q8N957 763 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 ZNF461Q8TAF7 563 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 FRS2Q8WU20 508 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 TMEM125Q96AQ2 219 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 ZNF607Q96SK3 696 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 GTPBP2Q9BX10 602 aaKnown RBP12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 ELL3Q9HB65 397 aaPredicted RBP12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 VPS29Q9UBQ0 182 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 SLCO3A1Q9UIG8 710 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 FZD4Q9ULV1 537 aa12.15□□□□□ -0.46
SLC6A1-201ENST00000287766 TRBV23OR9-2A0A075B6M9 112 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 INPPL1O15357 1258 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 FCER2P06734 321 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 SLC5A2P31639 672 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 CD97P48960 835 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 TAS2R41P59536 307 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 NOGQ13253 232 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 SMCO1Q147U7 214 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 ATP6AP1Q15904 470 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 ARSIQ5FYB1 569 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 OR2T5Q6IEZ7 315 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 ADGRG5Q8IZF4 528 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 OR2T29Q8NH02 315 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 GAB3Q8WWW8 586 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 IMP3Q9NV31 184 aaKnown RBP12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 ZDHHC3Q9NYG2 299 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 VAPAQ9P0L0 249 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 PCDHB3Q9Y5E6 796 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 A0A075B6Q4 140 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 GNB5O14775 395 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 SMAD6O43541 496 aaKnown RBP12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 ATXN1LP0C7T5 689 aaKnown RBP12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 RPL35P42766 123 aaKnown RBP12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 FAM180BQ6P0A1 224 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 FUNDC1Q8IVP5 155 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 ABHD11Q8NFV4 315 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 CD200R1Q8TD46 325 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 UBXN10Q96LJ8 280 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 ATOH8Q96SQ7 321 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 OR2B2Q9GZK3 357 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 OR2AG1Q9H205 316 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 PAK1IP1Q9NWT1 392 aaPredicted RBP12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 ERVK13-1Q9NX77 482 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 B4GALT6Q9UBX8 382 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 TTC3P53804 2025 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 SBF2Q86WG5 1849 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 H0YJX3 145 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 PDYNP01213 254 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 C1QAP02745 245 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 IFNA6P05013 189 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 HOXB6P17509 224 aaKnown RBP12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 TXNL4AP83876 142 aaKnown RBP12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 MVKQ03426 396 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 C6orf141Q5SZD1 244 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 GPRC6AQ5T6X5 926 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 ANXA8L1Q5VT79 327 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 DUS1LQ6P1R4 473 aaKnown RBP12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 SUSD1Q6UWL2 747 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 RNF111Q6ZNA4 994 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 NXPE1Q8N323 547 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 FAM110BQ8TC76 370 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 GPR78Q96P69 363 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 MMP27Q9H306 513 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 NANSQ9NR45 359 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 RHCGQ9UBD6 479 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 PPIEQ9UNP9 301 aaKnown RBP12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 INMT-MINDY4F8WBC2 141 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 ACOT8O14734 319 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 CRYZL1O95825 349 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 BMP2P12643 396 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 CTNNB1P35222 781 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 CBLBQ13191 982 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 FAM220AQ7Z4H9 259 aa12.14□□□□□ -0.47
SLC6A1-201ENST00000287766 TMEM102Q8N9M5 508 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms