RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RPP30P78346 268 aaKnown RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM220Q6QAJ8 160 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF781Q8N8C0 355 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 HOXB13Q92826 284 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 EFCAB11Q9BUY7 163 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 TRMT61BQ9BVS5 477 aaKnown RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ACTL8Q9H568 366 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 WDR26Q9H7D7 661 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 FETUBQ9UGM5 382 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 VWDEQ8N2E2 1590 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 TTC3P53804 2025 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 CDRT1O95170 752 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 OXTRP30559 389 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ACTC1P68032 377 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ACTA1P68133 377 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ERN2Q76MJ5 926 aaKnown RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF367Q7RTV3 350 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 TERB2Q8NHR7 220 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 MAELQ96JY0 434 aaKnown RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 A0A1W2PRB8 838 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 PROM1O43490 865 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 CXCL14O95715 111 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 IRF5Q13568 498 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 LASP1Q14847 261 aaKnown RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM110Q86TL2 294 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 C12orf29Q8N999 325 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 VPS29Q9UBQ0 182 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 A0A1W2PPM1 405 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 TRBC2A0A5B9 178 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 CDC7O00311 574 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 SYN3O14994 580 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 CCL16O15467 120 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 CREBL2O60519 120 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 HNRNPA0Q13151 305 aaKnown RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 UAP1L1Q3KQV9 507 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 TUBG2Q9NRH3 451 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 POLLQ9UGP5 575 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 SPATA31A6Q5VVP1 1343 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 IL7P13232 177 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 EFNA1P20827 205 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 DPP6P42658 865 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF45Q02386 682 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 AKR1C8PQ5T2L2 129 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 THEM6Q8WUY1 208 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 RBP7Q96R05 134 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 CNTN3Q9P232 1028 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 HES2Q9Y543 173 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF84P51523 738 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 HTD2P86397 168 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 NTRK2Q16620 822 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 PRAMEF14Q5SWL7 426 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 PRAMEF13Q5VWM6 474 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 FBXL16Q8N461 479 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM209Q96SK2 561 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 FZD3Q9NPG1 666 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 OAZ3Q9UMX2 235 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 OR4F21O95013 312 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 DSC2Q02487 901 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 SLBPQ14493 270 aaKnown RBP eCLIP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ODF4Q2M2E3 257 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 NBPF12Q5TAG4 269 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 LCLAT1Q6UWP7 414 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 CXCL17Q6UXB2 119 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 CYP4V2Q6ZWL3 525 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 BEST3Q8N1M1 668 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 LRRN4Q8WUT4 740 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 LRRC58Q96CX6 371 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 PKP4Q99569 1192 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 TCEAL7Q9BRU2 100 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 FZD4Q9ULV1 537 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 DHDHQ9UQ10 334 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 BAZ2AQ9UIF9 1905 aaKnown RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 CLDN5O00501 218 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ENDOUP21128 410 aaKnown RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 RRAS2P62070 204 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 CDNFQ49AH0 187 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 VITQ6UXI7 678 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 UTS2RQ9UKP6 389 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 GXYLT2A0PJZ3 443 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ERI3O43414 337 aaKnown RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 GABBR2O75899 941 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 SLC18A2Q05940 514 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 FAM198BQ6UWH4 519 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 KIF18BQ86Y91 864 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 RCBTB1Q8NDN9 531 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 GPR152Q8TDT2 470 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 BARD1Q99728 777 aaKnown RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ZBTB26Q9HCK0 441 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM45AQ9NWC5 275 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 C9JVG2 144 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 NPIPA2E9PIF3 369 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 NPIPA3F8WFD2 350 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 OXSR1O95747 527 aaPredicted RBP8.47□□□□□ -1.05
NIPBL-201ENST00000282516 APOC3P02656 99 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 IRF2P14316 349 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 GHRHRQ02643 423 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 ECH1Q13011 328 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 MOGQ16653 247 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 GPR157Q5UAW9 335 aa8.47□□□□□ -1.05
NIPBL-201ENST00000282516 KIAA1614Q5VZ46 1190 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms