RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 PPP1R16AQ96I34 528 aa11.72□□□□□ -0.53
ERBB2-201ENST00000269571 MGLLQ99685 303 aa11.72□□□□□ -0.53
ERBB2-201ENST00000269571 CRTAC1Q9NQ79 661 aa11.72□□□□□ -0.53
ERBB2-201ENST00000269571 AGPAT4Q9NRZ5 378 aa11.72□□□□□ -0.53
ERBB2-201ENST00000269571 COPZ2Q9P299 210 aa11.72□□□□□ -0.53
ERBB2-201ENST00000269571 NCKAP1Q9Y2A7 1128 aa11.72□□□□□ -0.53
ERBB2-201ENST00000269571 LAMA4Q16363 1823 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 TCRBV3S1A0A5B6 114 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 SULT1C4O75897 302 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 SNAI1O95863 264 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 HAPLN1P10915 354 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 PTPN2P17706 415 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 SCNN1AP37088 669 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 WASP42768 502 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 GUCA1AP43080 201 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 ASMTP46597 345 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 ATP4BP51164 291 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 RACK1P63244 317 aaKnown RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 DBPQ10586 325 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 TAF1AQ15573 450 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 NHSL2Q5HYW2 709 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 CRB2Q5IJ48 1285 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 B3GNT9Q6UX72 402 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 GPRIN1Q7Z2K8 1008 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 ZNF655Q8N720 491 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 GPR83Q9NYM4 423 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 COMMD9Q9P000 198 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 TLR4O00206 839 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 HAS3O00219 553 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 SLC9A3R1O14745 358 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 SHMT2P34897 504 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 SPAM1P38567 509 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 SMN1Q16637 294 aaKnown RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 SLC36A3Q495N2 470 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 FAM209AQ5JX71 171 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 C9orf64Q5T6V5 341 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 RGL4Q8IZJ4 473 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 CHCHD4Q8N4Q1 142 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 C1orf52Q8N6N3 182 aaKnown RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 OR4K1Q8NGD4 311 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 OR6Q1Q8NGQ2 317 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 KLHL6Q8WZ60 621 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 OSBPL2Q9H1P3 480 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 MAGEH1Q9H213 219 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 ZBTB20Q9HC78 741 aaPredicted RBP11.71□□□□□ -0.53
ERBB2-201ENST00000269571 ENPP5Q9UJA9 477 aa11.71□□□□□ -0.53
ERBB2-201ENST00000269571 INMT-MINDY4F8WBC2 141 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 M0R129 80 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 TGFB1P01137 390 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 M6PRP20645 277 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 CD247P20963 164 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 MAPKAPK2P49137 400 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 XKP51811 444 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 PSMD4P55036 377 aaKnown RBP11.71□□□□□ -0.54
ERBB2-201ENST00000269571 CLDN10P78369 228 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 SCARB2Q14108 478 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 PCBP2Q15366 365 aaKnown RBP eCLIP11.71□□□□□ -0.542e-15■■■□□ 15.6
ERBB2-201ENST00000269571 LYPLAL1Q5VWZ2 237 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 IDO2Q6ZQW0 420 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 ZNF534Q76KX8 674 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 PARGQ86W56 976 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 OR10H4Q8NGA5 316 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 UFD1Q92890 307 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 TMEM125Q96AQ2 219 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 SPACA7Q96KW9 195 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 YIPF4Q9BSR8 244 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 FAIM2Q9BWQ8 316 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 FLRT1Q9NZU1 646 aa11.71□□□□□ -0.54
ERBB2-201ENST00000269571 TRBC2A0A5B9 178 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 INHAP05111 366 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 DPP6P42658 865 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 KCNQ1P51787 676 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 SELPLGQ14242 412 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 ABRAXAS2Q15018 415 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 TEAD4Q15561 434 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 SPATC1Q76KD6 591 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 TMEM151AQ8N4L1 468 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 TNFAIP8L1Q8WVP5 186 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 PTERQ96BW5 349 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 DERL2Q9GZP9 239 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 TM9SF3Q9HD45 589 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 GLTPQ9NZD2 209 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 RPL36Q9Y3U8 105 aaKnown RBP11.7□□□□□ -0.54
ERBB2-201ENST00000269571 TRBV23OR9-2A0A075B6M9 112 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 H3BUI4 141 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 TNFRSF1BP20333 461 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 PRPS1L1P21108 318 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 KELP23276 732 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 DCTP40126 519 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 ARF5P84085 180 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 CDK5R2Q13319 367 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 FBXO43Q4G163 708 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 C10orf62Q5T681 223 aaPredicted RBP11.7□□□□□ -0.54
ERBB2-201ENST00000269571 ZNF557Q8N988 423 aaPredicted RBP11.7□□□□□ -0.54
ERBB2-201ENST00000269571 WRAP53Q9BUR4 548 aaKnown RBP11.7□□□□□ -0.54
ERBB2-201ENST00000269571 MMP28Q9H239 520 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 GSTO2Q9H4Y5 243 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 PRDM8Q9NQV8 689 aa11.7□□□□□ -0.54
ERBB2-201ENST00000269571 HCN3Q9P1Z3 774 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms