RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 HOXD9P28356 352 aaPredicted RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 GRB7Q14451 532 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 UBAP2Q5T6F2 1119 aaKnown RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 PARS2Q7L3T8 475 aaKnown RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 ZNF761Q86XN6 746 aaPredicted RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 OR52B6Q8NGF0 335 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 OR5K1Q8NHB7 308 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 DENND1AQ8TEH3 1009 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 F2RL3Q96RI0 385 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 RAB26Q9ULW5 256 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 SDHDO14521 159 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 PCDHGA12O60330 932 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 GJA4P35212 333 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 CASRP41180 1078 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 TRAF7Q6Q0C0 670 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 CCDC116Q8IYX3 515 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 SNX33Q8WV41 574 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 ISG20Q96AZ6 181 aaKnown RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 RNF31Q96EP0 1072 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 PDE7BQ9NP56 450 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 LYARQ9NX58 379 aaKnown RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 CRNNQ9UBG3 495 aaPredicted RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 LAMA4Q16363 1823 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 MYO18AQ92614 2054 aaKnown RBP13.24□□□□□ -0.29
NPC1-201ENST00000269228 DUX1O43812 170 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 CKMT2P17540 419 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 C18orf21Q32NC0 220 aaPredicted RBP13.24□□□□□ -0.29
NPC1-201ENST00000269228 RNF130Q86XS8 419 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 OR4K14Q8NGD5 310 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 RAB8BQ92930 207 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 NELL2Q99435 816 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 KCNN2Q9H2S1 579 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 GIN1Q9NXP7 522 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.24□□□□□ -0.29
NPC1-201ENST00000269228 KHNYNO15037 678 aaKnown RBP13.24□□□□□ -0.29
NPC1-201ENST00000269228 F11P03951 625 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 HRH2P25021 359 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 RABIFP47224 123 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 ABATP80404 500 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 ARF5P84085 180 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 SHHQ15465 462 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 NDUFAF6Q330K2 333 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 SWT1Q5T5J6 900 aaKnown RBP13.24□□□□□ -0.29
NPC1-201ENST00000269228 TANGO2Q6ICL3 276 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 ZZZ3Q8IYH5 903 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 GHDCQ8N2G8 530 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 MR1Q95460 341 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 TMCC2O75069 709 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 JUPP14923 745 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 CXCR1P25024 350 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 ABRAXAS2Q15018 415 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 DECR1Q16698 335 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 PIANPQ8IYJ0 282 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 OR10G2Q8NGC3 310 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 RTP3Q9BQQ7 232 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 TPK1Q9H3S4 243 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 SCDO00767 359 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 EI24O14681 340 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 IL3P08700 152 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 MATN1P21941 496 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 ABHD18Q0P651 414 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 CRB2Q5IJ48 1285 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 C10orf62Q5T681 223 aaPredicted RBP13.24□□□□□ -0.29
NPC1-201ENST00000269228 KLHL24Q6TFL4 600 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 ISCA2Q86U28 154 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 CBARPQ8N350 705 aaPredicted RBP13.24□□□□□ -0.29
NPC1-201ENST00000269228 PTCHD1Q96NR3 888 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 KLRF1Q9NZS2 232 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 DMTF1Q9Y222 760 aa13.24□□□□□ -0.29
NPC1-201ENST00000269228 CD9P21926 228 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 IRS1P35568 1242 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 CLDN2P57739 230 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 OLR1P78380 273 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 HHEXQ03014 270 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 FAM180AQ6UWF9 173 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 LGI4Q8N135 537 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 KRTCAP2Q8N6L1 136 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 GEMIN6Q8WXD5 167 aaKnown RBP13.23□□□□□ -0.29
NPC1-201ENST00000269228 KLF15Q9UIH9 416 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 PDE10AQ9Y233 779 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 MYOCOSA0A1B0GUC4 107 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 GJB3O75712 270 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 ACADLP28330 430 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 AQP4P55087 323 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 TMEM240Q5SV17 173 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 EGFLAMQ63HQ2 1017 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 RLN3Q8WXF3 142 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 FUBP1Q96AE4 644 aaKnown RBP13.23□□□□□ -0.29
NPC1-201ENST00000269228 CPEB1Q9BZB8 566 aaKnown RBP13.23□□□□□ -0.29
NPC1-201ENST00000269228 PRTFDC1Q9NRG1 225 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 MKS1Q9NXB0 559 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 PSMD11O00231 422 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 RTCAO00442 366 aaKnown RBP13.23□□□□□ -0.29
NPC1-201ENST00000269228 SLC16A8O95907 504 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 RAB28P51157 221 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 GSTM4Q03013 218 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 NXPE4Q6UWF7 544 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 LIPIQ6XZB0 460 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 NRROSQ86YC3 692 aa13.23□□□□□ -0.29
NPC1-201ENST00000269228 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms