RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 FAM120CQ9NX05 1096 aaKnown RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 AHSPQ9NZD4 102 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 C6orf203Q9P0P8 240 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 BTBD3Q9Y2F9 522 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 SNX13Q9Y5W8 968 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 SNRNP200O75643 2136 aaKnown RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PRSS51A0A1B0GVH4 220 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 TRBC2A0A5B9 178 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 BTN3A3O00478 584 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 SCN2BO60939 215 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 HOXB9P17482 250 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 CD27P26842 260 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PTPN6P29350 595 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 DUOXA1Q1HG43 343 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 KIAA1614Q5VZ46 1190 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 CAMKMTQ7Z624 323 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 TAF8Q7Z7C8 310 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 ADGRF3Q8IZF5 1079 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.07□□□□□ -0.649e-7■□□□□ 10.4
SCAF11-201ENST00000266589 CLDN23Q96B33 292 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 AURKBQ96GD4 344 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 PRPF18Q99633 342 aaKnown RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 CPPED1Q9BRF8 314 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 REEP4Q9H6H4 257 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 COPS7BQ9H9Q2 264 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 MYNNQ9NPC7 610 aa11.07□□□□□ -0.64
SCAF11-201ENST00000266589 EXO1Q9UQ84 846 aaKnown RBP11.07□□□□□ -0.64
SCAF11-201ENST00000266589 AQP12BA6NM10 295 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 RTCAO00442 366 aaKnown RBP11.06□□□□□ -0.64
SCAF11-201ENST00000266589 HAT1O14929 419 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 YY2O15391 372 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 NDUFS4O43181 175 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 KLHL18O94889 574 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 VIPP01282 170 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 SERPIND1P05546 499 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 HOXB3P14651 431 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-201ENST00000266589 TPP2P29144 1249 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-201ENST00000266589 BCL6P41182 706 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 BLKP51451 505 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 HNRNPFP52597 415 aaKnown RBP11.06□□□□□ -0.64
SCAF11-201ENST00000266589 TAS2R50P59544 299 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 RPL6Q02878 288 aaKnown RBP11.06□□□□□ -0.64
SCAF11-201ENST00000266589 GPR18Q14330 331 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 TRIP10Q15642 601 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 FXNQ16595 210 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 AASDHQ4L235 1098 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-201ENST00000266589 LPCAT4Q643R3 524 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 AQP12AQ8IXF9 295 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 UBALD2Q8IYN6 164 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 CLECL1Q8IZS7 167 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 TTLQ8NG68 377 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 OR2T12Q8NG77 320 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 OR10A6Q8NH74 314 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 SLCO4A1Q96BD0 722 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 DUS3LQ96G46 650 aaKnown RBP11.06□□□□□ -0.64
SCAF11-201ENST00000266589 ZNF583Q96ND8 569 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 CENPKQ9BS16 269 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 ZNF717Q9BY31 904 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-201ENST00000266589 POT1Q9NUX5 634 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 SH3BP4Q9P0V3 963 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 CPNE7Q9UBL6 633 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 APOBEC3BQ9UH17 382 aaKnown RBP11.06□□□□□ -0.64
SCAF11-201ENST00000266589 ATP6V1HQ9UI12 483 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 KLHL20Q9Y2M5 609 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 AP4S1Q9Y587 144 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 PCDHB3Q9Y5E6 796 aa11.06□□□□□ -0.64
SCAF11-201ENST00000266589 ARHGEF17Q96PE2 2063 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-201ENST00000266589 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 MAP3K13O43283 966 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 CLEC3AO75596 197 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 WNT1P04628 370 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 DCNP07585 359 aaKnown RBP11.05□□□□□ -0.64
SCAF11-201ENST00000266589 FURINP09958 794 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 JUNDP17535 347 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 EFNA1P20827 205 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-201ENST00000266589 HRH2P25021 359 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 MAOBP27338 520 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 PEX2P28328 305 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 CD38P28907 300 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 SLC7A1P30825 629 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 TRPC1P48995 793 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 MC1RQ01726 317 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 C2orf80Q0P641 193 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 C1orf61Q13536 156 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 TAF11Q15544 211 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 LRRC36Q1X8D7 754 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 ZNF385BQ569K4 471 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 CCNYL2Q5T2Q4 361 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 FAM71E1Q6IPT2 247 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 R3HCC1LQ7Z5L2 792 aaKnown RBP11.05□□□□□ -0.64
SCAF11-201ENST00000266589 SFTPA2Q8IWL1 248 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 KBTBD2Q8IY47 623 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 LILRA2Q8N149 483 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 CAMKK1Q8N5S9 505 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 CADM4Q8NFZ8 388 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 CREB3L4Q8TEY5 395 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 CANT1Q8WVQ1 401 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 DNAJC9Q8WXX5 260 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 SLC22A18Q96BI1 424 aa11.05□□□□□ -0.64
SCAF11-201ENST00000266589 COQ8BQ96D53 544 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms