RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 VWA2Q5GFL6 755 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 XKR6Q5GH73 641 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 TECRLQ5HYJ1 363 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 PRAMEF9Q5VWM5 478 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 ATG9BQ674R7 924 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 KLC3Q6P597 504 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 TIFABQ6ZNK6 161 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 SHISA5Q8N114 240 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 TBC1D19Q8N5T2 526 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 AMER3Q8N944 861 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 SNX31Q8N9S9 440 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 TRPV3Q8NET8 790 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 OR9A4Q8NGU2 314 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 ZCCHC10Q8TBK6 192 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 NT5CQ8TCD5 201 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 STT3BQ8TCJ2 826 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 MIEF2Q96C03 454 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 MVB12AQ96EY5 273 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 SEMA4CQ9C0C4 833 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 DRC3Q9H069 523 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 SOX17Q9H6I2 414 aaPredicted RBP8.09□□□□□ -1.11
TMEM258-201ENST00000257262 WDR54Q9H977 334 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 GEMIN8Q9NWZ8 242 aaKnown RBP8.09□□□□□ -1.11
TMEM258-201ENST00000257262 CPSF2Q9P2I0 782 aaKnown RBP8.09□□□□□ -1.11
TMEM258-201ENST00000257262 OPTCQ9UBM4 332 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 CTSFQ9UBX1 484 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 ZNF282Q9UDV7 671 aaPredicted RBP8.09□□□□□ -1.11
TMEM258-201ENST00000257262 FETUBQ9UGM5 382 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 TBK1Q9UHD2 729 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 ZNF490Q9ULM2 529 aaPredicted RBP8.09□□□□□ -1.11
TMEM258-201ENST00000257262 MAN2B2Q9Y2E5 1009 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 LOC400499M0QZD8 3231 aa8.09□□□□□ -1.11
TMEM258-201ENST00000257262 PTPRQQ9UMZ3 2332 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 ATMQ13315 3056 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 IGLV3-12A0A075B6K2 115 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 A0A1W2PPM1 405 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 LRRC14BA6NHZ5 514 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 EIF4E1BA6NMX2 242 aaKnown RBP8.08□□□□□ -1.12
TMEM258-201ENST00000257262 FOXO6A8MYZ6 492 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 H0YIG0 161 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 K7EPI3 171 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 SGK494L7N484 410 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 PRPF4O43172 522 aaKnown RBP eCLIP8.08□□□□□ -1.12
TMEM258-201ENST00000257262 NDUFS4O43181 175 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 NSA2O95478 260 aaKnown RBP8.08□□□□□ -1.12
TMEM258-201ENST00000257262 B3GALT4O96024 378 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 RBP1P09455 135 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 ZGLP1P0C6A0 271 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 GFAPP14136 432 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 EPB42P16452 691 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 IL1RNP18510 177 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 CXCR2P25025 360 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 HSD17B3P37058 310 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 CCL11P51671 97 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 ALDH18A1P54886 795 aaKnown RBP8.08□□□□□ -1.12
TMEM258-201ENST00000257262 MAT1AQ00266 395 aaKnown RBP8.08□□□□□ -1.12
TMEM258-201ENST00000257262 IRF8Q02556 426 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 OCA2Q04671 838 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 KLC1Q07866 573 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 HYAL2Q12891 473 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 CHAF1BQ13112 559 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 CHIT1Q13231 466 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 KCNAB2Q13303 367 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 PWP1Q13610 501 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 ATP1A4Q13733 1029 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 SLBPQ14493 270 aaKnown RBP eCLIP8.08□□□□□ -1.12
TMEM258-201ENST00000257262 SETDB1Q15047 1291 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 ERCC6LQ2NKX8 1250 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 TSNAXIP1Q2TAA8 658 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 TUSC1Q2TAM9 212 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 WDR93Q6P2C0 686 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 TMIGD1Q6UXZ0 262 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 LRRC70Q7Z2Q7 622 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 PPP1R32Q7Z5V6 425 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 PDSS2Q86YH6 399 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 RAB43Q86YS6 212 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 APLFQ8IW19 511 aaPredicted RBP8.08□□□□□ -1.12
TMEM258-201ENST00000257262 PRSS58Q8IYP2 241 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 TMEM151AQ8N4L1 468 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 TEX9Q8N6V9 391 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 CREB3L4Q8TEY5 395 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 MZB1Q8WU39 189 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 UBTD2Q8WUN7 234 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 MTBPQ96DY7 904 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 WDR34Q96EX3 536 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 PTCD3Q96EY7 689 aaKnown RBP8.08□□□□□ -1.12
TMEM258-201ENST00000257262 ABHD17AQ96GS6 310 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 SCYL1Q96KG9 808 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 TRIM55Q9BYV6 548 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 ING2Q9H160 280 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 EHD1Q9H4M9 534 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 KLHL31Q9H511 634 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 NT5DC2Q9H857 520 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 ANKHQ9HCJ1 492 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 TMEM216Q9P0N5 145 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 PSMC3IPQ9P2W1 217 aaPredicted RBP8.08□□□□□ -1.12
TMEM258-201ENST00000257262 TRPC4Q9UBN4 977 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 NAALAD2Q9Y3Q0 740 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 SLC22A7Q9Y694 548 aa8.08□□□□□ -1.12
TMEM258-201ENST00000257262 NUP210LQ5VU65 1888 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms