RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 CAPN13Q6MZZ7 669 aaPredicted RBP12.15□□□□□ -0.47
RAB3IP-201ENST00000247833 ERAP2Q6P179 960 aa12.15□□□□□ -0.47
RAB3IP-201ENST00000247833 NLGN4XQ8N0W4 816 aa12.15□□□□□ -0.47
RAB3IP-201ENST00000247833 TRBV5-3A0A0A0MS03 114 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 J3KTA2 159 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 ZNF821O75541 412 aaPredicted RBP12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 GPR1P46091 355 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 NKX3-2P78367 333 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 GRIN2CQ14957 1233 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 CTF1Q16619 201 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 COX20Q5RI15 118 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 LIPJQ5W064 366 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 L3MBTL4Q8NA19 623 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 DNASE1L2Q92874 299 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 SORBS1Q9BX66 1292 aaKnown RBP12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 ACOT13Q9NPJ3 140 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 C11orf16Q9NQ32 467 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 PNMA8CA0A1B0GUJ8 204 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 KRBA1A5PL33 1030 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 YY2O15391 372 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 TPST2O60704 377 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 LATS1O95835 1130 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 STATHP02808 62 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 HLA-EP13747 358 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 VIPR1P32241 457 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 ELP6Q0PNE2 266 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 RGNQ15493 299 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 EXOC3L2Q2M3D2 409 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 IFI44LQ53G44 452 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 SOWAHCQ53LP3 525 aaPredicted RBP12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 ASTLQ6HA08 431 aaPredicted RBP12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 Q6ZNB5 142 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 HMGN2P46Q86SG4 172 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 PTOV1Q86YD1 416 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 CCDC103Q8IW40 242 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 STARD8Q92502 1023 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 CTPS2Q9NRF8 586 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 TMPRSS11EQ9UL52 423 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 RTCAO00442 366 aaKnown RBP12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 ITGAMP11215 1152 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 BMP4P12644 408 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 SLC6A12P48065 614 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 TBPL1P62380 186 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 SLC35A2P78381 396 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 NTHL1P78549 312 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 PPIGQ13427 754 aaKnown RBP eCLIP12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 CDKN3Q16667 212 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 KDM4DQ6B0I6 523 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 NIPAL1Q6NVV3 410 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 HTR3DQ70Z44 454 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 CBLL1Q75N03 491 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 TSPYL5Q86VY4 417 aaPredicted RBP12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 MYDGFQ969H8 173 aa12.14□□□□□ -0.47
RAB3IP-201ENST00000247833 CASP8AP2Q9UKL3 1982 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 ADAMDEC1O15204 470 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 SOX14O95416 240 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 MPC1LP0DKB6 136 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 LAG3P18627 525 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 GADD45AP24522 165 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 PSMA3P25788 255 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 HBA1P69905 142 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 OR2A12Q8NGT7 310 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 CHPT1Q8WUD6 406 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 DOHHQ9BU89 302 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 TPK1Q9H3S4 243 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 RLIMQ9NVW2 624 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 ASIC5Q9NY37 505 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 TAS2R16Q9NYV7 291 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 C5AR2Q9P296 337 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 TRPC4Q9UBN4 977 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 PORP16435 677 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 GTF2E2P29084 291 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 PRKAG1P54619 331 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 SP140Q13342 867 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 ZDHHC20Q5W0Z9 365 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 LAIR1Q6GTX8 287 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 TRIM40Q6P9F5 258 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 DEF8Q6ZN54 512 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 RASGEF1AQ8N9B8 481 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 ZBTB8BQ8NAP8 495 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 KLHL23Q8NBE8 558 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 ZNF740Q8NDX6 193 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 FKBP10Q96AY3 582 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 ITPAQ9BY32 194 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 DNMT3BQ9UBC3 853 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 ZNF282Q9UDV7 671 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 TSC22D4Q9Y3Q8 395 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 FNDC1Q4ZHG4 1894 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 FADS2P1A8MWK0 482 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 FGF18O76093 207 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 ADH1AP07327 375 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 TIA1P31483 386 aaKnown RBP eCLIP12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 CDK6Q00534 326 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 HSPB3Q12988 150 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 ARHGAP15Q53QZ3 475 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 BRAT1Q6PJG6 821 aa12.13□□□□□ -0.47
RAB3IP-201ENST00000247833 CCDC149Q6ZUS6 474 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms