RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TULP3O75386 442 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 FAUP35544 74 aaKnown RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 ZNF548Q8NEK5 533 aaPredicted RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 QRFPRQ96P65 431 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TMEM168Q9H0V1 697 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 SYNPO2LQ9H987 977 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 INMT-MINDY4F8WBC2 141 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 RB1P06400 928 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 GTDC1Q4AE62 458 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 SNX20Q7Z614 316 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 BEST4Q8NFU0 473 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 FOXN4Q96NZ1 517 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 MND1Q9BWT6 205 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ZNF214Q9UL59 606 aaPredicted RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 PADI3Q9ULW8 664 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 LCN1P31025 176 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TAS2R50P59544 299 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ILF3Q12906 894 aaKnown RBP eCLIP7.3□□□□□ -1.242e-9■■■□□ 17.4
RIF1-201ENST00000243326 CLECL1Q8IZS7 167 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 P2RY13Q9BPV8 354 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ZNF649Q9BS31 505 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TMEM27Q9HBJ8 222 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 FAM86C1Q9NVL1 165 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TMED5Q9Y3A6 229 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 PCDHGA6Q9Y5G7 932 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 PITPNM1O00562 1244 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 VIPR1P32241 457 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 PRPF38BQ5VTL8 546 aaKnown RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 TTLL2Q9BWV7 592 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 LGR4Q9BXB1 951 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 RASAL1O95294 804 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 BNC1Q01954 994 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 NNATQ16517 81 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 Q6ZPB1 254 aaPredicted RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 GPR142Q7Z601 462 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ZDHHC14Q8IZN3 488 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 PROKR2Q8NFJ6 384 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 CDK5RAP1Q96SZ6 601 aaKnown RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 PAK6Q9NQU5 681 aaPredicted RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 ALG5Q9Y673 324 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 SH3PXD2BA1X283 911 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ZNF860A6NHJ4 632 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 FBXO45P0C2W1 286 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 PRKACAP17612 351 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 LILRA4P59901 499 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 CYBRD1Q53TN4 286 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 KIAA1614Q5VZ46 1190 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ELP2Q6IA86 826 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ASF1BQ9NVP2 202 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 SLC31A1O15431 190 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ALPPP05187 535 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ARSIQ5FYB1 569 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 LRRC66Q68CR7 880 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 NANOGP8Q6NSW7 305 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 NUDT8Q8WV74 236 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 CST11Q9H112 138 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 SLC25A51Q9H1U9 297 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 NANOGQ9H9S0 305 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ARFGEF3Q5TH69 2177 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 INSIG1O15503 277 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 TGFB3P10600 412 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ZNF16P17020 682 aaPredicted RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 DDX6P26196 483 aaKnown RBP eCLIP7.29□□□□□ -1.241e-8■■■□□ 17.3
RIF1-201ENST00000243326 HNMTP50135 292 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 PTP4A2Q12974 167 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 PEX5LQ8IYB4 626 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 RPL3LQ92901 407 aaKnown RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 GDAP2Q9NXN4 497 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 TAS2R7Q9NYW3 318 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 MGAT4CQ9UBM8 478 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 NUP205Q92621 2012 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 MYH2Q9UKX2 1941 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 PSMA3P25788 255 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 CBLBQ13191 982 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 RBM12BQ8IXT5 1001 aaKnown RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 RIOK2Q9BVS4 552 aaKnown RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 PNO1Q9NRX1 252 aaKnown RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 GVINP1Q7Z2Y8 2422 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 AOC1P19801 751 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 IGFBP4P22692 258 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 NFATC3Q12968 1075 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 COMTD1Q86VU5 262 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 GPC2Q8N158 579 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 INO80EQ8NBZ0 244 aaPredicted RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 BRSK1Q8TDC3 778 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 SMIM14Q96QK8 99 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 UBQLN2Q9UHD9 624 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 PDYNP01213 254 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 IL7P13232 177 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 ZNF24P17028 368 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 SMSP52788 366 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 OXR1Q8N573 874 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 OR2L8Q8NGY9 312 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 OR4C6Q8NH72 309 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 GPR151Q8TDV0 419 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 CKLFQ9UBR5 152 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 H2AFB2P0C5Z0 115 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 GPD2P43304 727 aa7.29□□□□□ -1.24
RIF1-201ENST00000243326 CRYBB1P53674 252 aaPredicted RBP7.29□□□□□ -1.24
RIF1-201ENST00000243326 RELAQ04206 551 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms