RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SCARF2Q96GP6 870 aaPredicted RBP17.72■□□□□ 0.43
HOXC11-201ENST00000243082 AIF1LQ9BQI0 150 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 TRPV5Q9NQA5 729 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 MOSPD1Q9UJG1 213 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 GPSM3Q9Y4H4 160 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 EME2A4GXA9 379 aaPredicted RBP17.72■□□□□ 0.43
HOXC11-201ENST00000243082 H7BY64 318 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 KCNJ13O60928 360 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 RPS9P46781 194 aaKnown RBP17.72■□□□□ 0.43
HOXC11-201ENST00000243082 CCR8P51685 355 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 TAS2R50P59544 299 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 C2orf80Q0P641 193 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 GRSF1Q12849 480 aaKnown RBP eCLIP17.72■□□□□ 0.43
HOXC11-201ENST00000243082 GAB1Q13480 694 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 COL19A1Q14993 1142 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 VMACQ2NL98 169 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 SLC36A3Q495N2 470 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 USP30Q70CQ3 517 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 PNPT1Q8TCS8 783 aaKnown RBP17.72■□□□□ 0.43
HOXC11-201ENST00000243082 MAGEE2Q8TD90 523 aaPredicted RBP17.72■□□□□ 0.43
HOXC11-201ENST00000243082 PRAP1Q96NZ9 151 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 SORBS1Q9BX66 1292 aaKnown RBP17.72■□□□□ 0.43
HOXC11-201ENST00000243082 MAGIXQ9H6Y5 334 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 CD93Q9NPY3 652 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 IMP3Q9NV31 184 aaKnown RBP17.72■□□□□ 0.43
HOXC11-201ENST00000243082 DNAJB9Q9UBS3 223 aa17.72■□□□□ 0.43
HOXC11-201ENST00000243082 BRWD1Q9NSI6 2320 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 CACNB4O00305 520 aaPredicted RBP17.71■□□□□ 0.43
HOXC11-201ENST00000243082 CCNDBP1O95273 360 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 GNAO1P09471 354 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 CXCR2P25025 360 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 REEP5Q00765 189 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 CTBSQ01459 385 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 MPEG1Q2M385 716 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 DEPDC1Q5TB30 811 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 CLEC4FQ8N1N0 589 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 PGBD3Q8N328 593 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 ZFP90Q8TF47 636 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 ASB12Q8WXK4 309 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 POP5Q969H6 163 aaKnown RBP17.71■□□□□ 0.43
HOXC11-201ENST00000243082 PYURFQ96I23 114 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 MRGPRX1Q96LB2 322 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 CHST8Q9H2A9 424 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 XKR8Q9H6D3 395 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 FGF22Q9HCT0 170 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 SMPD3Q9NY59 655 aaPredicted RBP17.71■□□□□ 0.43
HOXC11-201ENST00000243082 MTCH2Q9Y6C9 303 aa17.71■□□□□ 0.43
HOXC11-201ENST00000243082 FEZF1A0PJY2 475 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 POM121BA6NF01 834 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 ANKDD1BA6NHY2 528 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 OR52A4PA6NMU1 304 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 CST1P01037 141 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 TPP2P29144 1249 aaPredicted RBP17.71■□□□□ 0.42
HOXC11-201ENST00000243082 MRPS21P82921 87 aaKnown RBP17.71■□□□□ 0.42
HOXC11-201ENST00000243082 LRRC74AQ0VAA2 488 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 C16orf72Q14CZ0 275 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 PRSS53Q2L4Q9 553 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 R3HCC1LQ7Z5L2 792 aaKnown RBP17.71■□□□□ 0.42
HOXC11-201ENST00000243082 OR10Q1Q8NGQ4 319 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 GOT1L1Q8NHS2 421 aaPredicted RBP17.71■□□□□ 0.42
HOXC11-201ENST00000243082 DPH2Q9BQC3 489 aaPredicted RBP17.71■□□□□ 0.42
HOXC11-201ENST00000243082 MS4A8Q9BY19 250 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 ZNF717Q9BY31 904 aaPredicted RBP17.71■□□□□ 0.42
HOXC11-201ENST00000243082 FAM192AQ9GZU8 254 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 NT5DC2Q9H857 520 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 NCKAP1Q9Y2A7 1128 aa17.71■□□□□ 0.42
HOXC11-201ENST00000243082 MAGED1Q9Y5V3 778 aaPredicted RBP17.71■□□□□ 0.42
HOXC11-201ENST00000243082 A0A1B0GTW7 788 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 PLPP1O14494 284 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 SCAMP1O15126 338 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 RAB28P51157 221 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 CLDN2P57739 230 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 CYP4F2P78329 520 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 UAP1L1Q3KQV9 507 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 LIN52Q52LA3 116 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 CYBRD1Q53TN4 286 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 KHDRBS2Q5VWX1 349 aaKnown RBP17.7■□□□□ 0.42
HOXC11-201ENST00000243082 ERICH5Q6P6B1 374 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 TMEM92Q6UXU6 159 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 EID3Q8N140 333 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 SYNPOQ8N3V7 929 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 RAB42Q8N4Z0 105 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 FAM47BQ8NA70 645 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 OR4A15Q8NGL6 344 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 C8orf33Q9H7E9 229 aaPredicted RBP17.7■□□□□ 0.42
HOXC11-201ENST00000243082 PRDM8Q9NQV8 689 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 PNPLA3Q9NST1 481 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 ATAD3AQ9NVI7 634 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 VPS4AQ9UN37 437 aa17.7■□□□□ 0.42
HOXC11-201ENST00000243082 IGKV1-8A0A0C4DH67 115 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 C2CD4DB7Z1M9 353 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 PGM3O95394 542 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 TFAP2AP05549 437 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 NELFEP18615 380 aaKnown RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 MYF6P23409 242 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 PKLRP30613 574 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 RPL3P39023 403 aaKnown RBP17.69■□□□□ 0.42
HOXC11-201ENST00000243082 ARSFP54793 590 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 HBA1P69905 142 aa17.69■□□□□ 0.42
HOXC11-201ENST00000243082 RGNQ15493 299 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms