RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 NRIP1P48552 1158 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 FOXA1P55317 472 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 MTPNP58546 118 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 TAS2R39P59534 338 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 RCAN2Q14206 197 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 PAFAH1B3Q15102 231 aaKnown RBP19.19■□□□□ 0.66
HOXC13-201ENST00000243056 GPR19Q15760 415 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 FLYWCH1Q4VC44 716 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 GLCCI1Q86VQ1 547 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 PAF1Q8N7H5 531 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 ADAMTS19Q8TE59 1207 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 ING5Q8WYH8 240 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 SLC47A1Q96FL8 570 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 BARD1Q99728 777 aaKnown RBP19.19■□□□□ 0.66
HOXC13-201ENST00000243056 SLC39A8Q9C0K1 460 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 TRHDEQ9UKU6 1024 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 PCDHGB3Q9Y5G1 929 aa19.19■□□□□ 0.66
HOXC13-201ENST00000243056 H3BNC9 293 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 OR5F1O95221 314 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 CKMP06732 381 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 HGFP14210 728 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 IGFBP5P24593 272 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 KCNK10P57789 538 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 ERVK-21P61565 698 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 SMAD3P84022 425 aaKnown RBP19.18■□□□□ 0.66
HOXC13-201ENST00000243056 CTBP1Q13363 440 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 IKZF1Q13422 519 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 LAPTM4AQ15012 233 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 ZNF782Q6ZMW2 699 aaPredicted RBP19.18■□□□□ 0.66
HOXC13-201ENST00000243056 OR52K2Q8NGK3 314 aa19.18■□□□□ 0.66
HOXC13-201ENST00000243056 SECISBP2Q96T21 854 aaKnown RBP19.18■□□□□ 0.66
HOXC13-201ENST00000243056 KIAA0513O60268 411 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 MRPS14O60783 128 aaKnown RBP19.17■□□□□ 0.66
HOXC13-201ENST00000243056 WBP4O75554 376 aaKnown RBP19.17■□□□□ 0.66
HOXC13-201ENST00000243056 CDH13P55290 713 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 FAM209BQ5JX69 171 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 GRASPQ7Z6J2 395 aaPredicted RBP19.17■□□□□ 0.66
HOXC13-201ENST00000243056 ADGRG3Q86Y34 549 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 ARHGAP12Q8IWW6 846 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 OR8K5Q8NH50 307 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 SEC22CQ9BRL7 303 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 SLC46A2Q9BY10 475 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 ACTR8Q9H981 624 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 CASS4Q9NQ75 786 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 HRH3Q9Y5N1 445 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 GMPPBQ9Y5P6 360 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 GPR45Q9Y5Y3 372 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 PRR23AA6NEV1 266 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 NUPL2O15504 423 aaKnown RBP19.17■□□□□ 0.66
HOXC13-201ENST00000243056 PMPCBO75439 489 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 EPHA2P29317 976 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 HTR7P34969 479 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 GBX2P52951 348 aaPredicted RBP19.17■□□□□ 0.66
HOXC13-201ENST00000243056 CRISP3P54108 245 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 CREMQ03060 361 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 QPRTQ15274 297 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 SLC35F1Q5T1Q4 408 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 CCDC71Q8IV32 467 aaPredicted RBP19.17■□□□□ 0.66
HOXC13-201ENST00000243056 WDR48Q8TAF3 677 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 TWIST2Q8WVJ9 160 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 PTP4A1Q93096 173 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 RHBDF1Q96CC6 855 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 KLF16Q9BXK1 252 aaPredicted RBP19.17■□□□□ 0.66
HOXC13-201ENST00000243056 GHITMQ9H3K2 345 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 TUBB1Q9H4B7 451 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 MCUBQ9NWR8 336 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 ING3Q9NXR8 418 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 VNN3Q9NY84 501 aa19.17■□□□□ 0.66
HOXC13-201ENST00000243056 FHP07954 510 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 CPN2P22792 545 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 SCN1BQ07699 218 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 KEAP1Q14145 624 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 RFX4Q33E94 735 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 CCDC149Q6ZUS6 474 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 LAX1Q8IWV1 398 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 BBS7Q8IWZ6 715 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 CHPFQ8IZ52 775 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 VN1R2Q8NFZ6 395 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 SLC22A8Q8TCC7 542 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 FCGR1BQ92637 280 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 DNASE1L2Q92874 299 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 TUBGCP3Q96CW5 907 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 KCNA7Q96RP8 456 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 SLC28A3Q9HAS3 691 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 POLG2Q9UHN1 485 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 CSNK1G3Q9Y6M4 447 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 COL6A3P12111 3177 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 CARNS1A5YM72 827 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 RNGTTO60942 597 aaKnown RBP19.16■□□□□ 0.66
HOXC13-201ENST00000243056 TACR2P21452 398 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 CLCNKAP51800 687 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 SH3BP2P78314 561 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 IPCEF1Q8WWN9 437 aaPredicted RBP19.16■□□□□ 0.66
HOXC13-201ENST00000243056 FOPNLQ96NB1 174 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 MYOCQ99972 504 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 DYRK4Q9NR20 520 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 RIMKLBQ9ULI2 386 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 BTRCQ9Y297 605 aa19.16■□□□□ 0.66
HOXC13-201ENST00000243056 ZFP37Q9Y6Q3 630 aaPredicted RBP19.16■□□□□ 0.66
HOXC13-201ENST00000243056 WASHC1A8K0Z3 465 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms