RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 G6PDP11413 515 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 BTN3A2P78410 334 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SHEQ5VZ18 495 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 CDCA5Q96FF9 252 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 ABCG8Q9H221 673 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 TMEM39AQ9NV64 488 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 OR12D3Q9UGF7 316 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF487B1APH4 448 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 F5H0A9 414 aaPredicted RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 PCDHGA12O60330 932 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 ANXA5P08758 320 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF7P17097 686 aaPredicted RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 LIPAP38571 399 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 ETV6P41212 452 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 ARCN1P48444 511 aaKnown RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 GHRHRQ02643 423 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 POU4F2Q12837 409 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SLC10A2Q12908 348 aaPredicted RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 GSG1LQ6UXU4 331 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 OR6S1Q8NH40 331 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 RTP4Q96DX8 246 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 CSF3RQ99062 836 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 THAP7Q9BT49 309 aaPredicted RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 TTPALQ9BTX7 342 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SPATA5L1Q9BVQ7 753 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 TGIF2Q9GZN2 237 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SLIRPQ9GZT3 109 aaKnown RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 POLR2J3Q9H1A7 115 aaKnown RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 TPT1P8Q9HAU6 139 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 TRPV4Q9HBA0 871 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 A0A096LPI6 279 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 TTC24A2A3L6 582 aaPredicted RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 WASH4PA8MWX3 477 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SERPIND1P05546 499 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SBK2P0C263 348 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 UBBP0CG47 229 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 UBCP0CG48 685 aaKnown RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 GLULP15104 373 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 EPCAMP16422 314 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 PTPN6P29350 595 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 C21orf33P30042 268 aaPredicted RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 RPS14P62263 151 aaKnown RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 RPS27AP62979 156 aaKnown RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 UBA52P62987 128 aaKnown RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 NKX3-2P78367 333 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 AIMP2Q13155 320 aaKnown RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 PTPRNQ16849 979 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 TECRLQ5HYJ1 363 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 ATAT1Q5SQI0 421 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 CD276Q5ZPR3 534 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 GTF2IRD2BQ6EKJ0 949 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 MARVELD3Q96A59 401 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 KCNA7Q96RP8 456 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 IPPKQ9H8X2 491 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 GORASP2Q9H8Y8 452 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 NMRK2Q9NPI5 230 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SPHK1Q9NYA1 384 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 DNAJC27Q9NZQ0 273 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 TRPC4Q9UBN4 977 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SPATA31A1Q5TZJ5 1347 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 LCHNA4D1U4 455 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 ANKRD28O15084 1053 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 RETP07949 1114 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 SUPT20HL2P0C7V6 817 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 GRK5P34947 590 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 SEMA3BQ13214 749 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 GTF2H2Q13888 395 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 GTF2H2CQ6P1K8 395 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 NLRC3Q7RTR2 1065 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 FAM122BQ7Z309 247 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.46□□□□□ -0.41
VAMP4-201ENST00000236192 PQLC3Q8N755 202 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 PXT1Q8NFP0 134 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 USP7Q93009 1102 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 RPL10LQ96L21 214 aaKnown RBP12.46□□□□□ -0.41
VAMP4-201ENST00000236192 SDR39U1Q9NRG7 319 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-201ENST00000236192 RAD18Q9NS91 495 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 DCAF16Q9NXF7 216 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 GULP1Q9UBP9 304 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 LOC285095A0A1B0GVY8 99 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 J3KR12 359 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 UBFD1O14562 309 aaKnown RBP12.46□□□□□ -0.41
VAMP4-201ENST00000236192 MAFO75444 373 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-201ENST00000236192 IFNA10P01566 189 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 HRGP04196 525 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 ICAM1P05362 532 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 TAL1P17542 331 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-201ENST00000236192 ENPP1P22413 925 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 CD86P42081 329 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 NFIXQ14938 502 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 TAF13Q15543 124 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 FBXO48Q5FWF7 155 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 CPTPQ5TA50 214 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 CDC42EP5Q6NZY7 148 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 GLT6D1Q7Z4J2 308 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 ZER1Q7Z7L7 766 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 DCBLD1Q8N8Z6 715 aa12.46□□□□□ -0.41
VAMP4-201ENST00000236192 ACBD4Q8NC06 268 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms